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斑马鱼对精神活性药物反应的二维与三维评分比较:确定何时需要进行三维分析

Comparison between two- and three-dimensional scoring of zebrafish response to psychoactive drugs: identifying when three-dimensional analysis is needed.

作者信息

Macrì Simone, Clément Romain J G, Spinello Chiara, Porfiri Maurizio

机构信息

Department of Mechanical and Aerospace Engineering, New York University, Tandon School of Engineering, Brooklyn, NY, USA.

Centre for Behavioural Sciences and Mental Health, Istituto Superiore di Sanità, Rome, Italy.

出版信息

PeerJ. 2019 Oct 16;7:e7893. doi: 10.7717/peerj.7893. eCollection 2019.

Abstract

Zebrafish () have recently emerged as a valuable laboratory species in the field of behavioral pharmacology, where they afford rapid and precise high-throughput drug screening. Although the behavioral repertoire of this species manifests along three-dimensional (3D), most of the efforts in behavioral pharmacology rely on two-dimensional (2D) projections acquired from a single overhead or front camera. We recently showed that, compared to a 3D scoring approach, 2D analyses could lead to inaccurate claims regarding individual and social behavior of drug-free experimental subjects. Here, we examined whether this conclusion extended to the field of behavioral pharmacology by phenotyping adult zebrafish, acutely exposed to citalopram (30, 50, and 100 mg/L) or ethanol (0.25%, 0.50%, and 1.00%), in the novel tank diving test over a 6-min experimental session. We observed that both compounds modulated the time course of general locomotion and anxiety-related profiles, the latter being represented by specific behaviors (erratic movements and freezing) and avoidance of anxiety-eliciting areas of the test tank (top half and distance from the side walls). We observed that 2D projections of 3D trajectories (ground truth data) may introduce a source of unwanted variation in zebrafish behavioral phenotyping. Predictably, both 2D views underestimate absolute levels of general locomotion. Additionally, while data obtained from a camera positioned on top of the experimental tank are similar to those obtained from a 3D reconstruction, 2D front view data yield false negative findings.

摘要

斑马鱼()最近已成为行为药理学领域一种有价值的实验物种,可用于快速、精确的高通量药物筛选。尽管该物种的行为表现具有三维(3D)特征,但行为药理学的大多数研究都依赖于从单个头顶或前方摄像头获取的二维(2D)投影。我们最近发现,与3D评分方法相比,2D分析可能会导致关于无药物实验对象个体和社会行为的不准确结论。在此,我们通过对成年斑马鱼进行表型分析来研究这一结论是否适用于行为药理学领域,这些成年斑马鱼在6分钟的实验过程中,在新型水槽潜水试验中急性暴露于西酞普兰(30、50和100毫克/升)或乙醇(0.25%、0.50%和1.00%)中。我们观察到,这两种化合物都调节了一般运动和焦虑相关特征的时间进程,后者由特定行为(不规则运动和僵住)以及对试验水槽中引发焦虑区域(上半部分和离侧壁的距离)的回避来体现。我们发现,3D轨迹的2D投影(真实数据)可能会在斑马鱼行为表型分析中引入不必要的变异来源。可以预见的是,两种2D视图都会低估一般运动的绝对水平。此外,虽然从位于实验水槽顶部的摄像头获得的数据与从3D重建获得的数据相似,但2D前视图数据会产生假阴性结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c23/6800527/7d3fe7a58bee/peerj-07-7893-g001.jpg

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