Department of Clinical Laboratory, AlZahra Hospital, Isfahan University of Medical Sciences, Isfahan, Iran.
Department of Chemistry, University of Sistan and Baluchestan, Zahedan, Iran.
J Biomol Struct Dyn. 2020 Oct;38(16):4746-4763. doi: 10.1080/07391102.2019.1689170. Epub 2019 Nov 14.
In this study, the interactions of a novel metal complex [Dy(bpy)Cl.OH] (bpy is 2,2'-bipyridine) with fish salmon DNA (FS-DNA) and bovine serum albumin (BSA) were investigated by experimental and theoretical methods. All results suggested significant binding between the Dy(III) complex with FS-DNA and BSA. The binding constants (), Stern-Volmer quenching constants () of Dy(III)-complex with FS-DNA and BSA at various temperatures as well as thermodynamic parameters using Van't Hoff equation were obtained. The experimental results from absorption, ionic strength, iodide ion quenching, ethidium bromide (EtBr) quenching studies and positive Δ˚ and Δ˚ suggested that hydrophobic groove-binding mode played a predominant role in the binding of Dy(III)-complex with FS-DNA. Indeed, the molecular docking results for DNA-binding were in agreement with experimental data. Besides, the results found from experimental and molecular modeling indicated that the Dy(III)complex bound to BSA Van der Waals interactions. Moreover, the results of competitive tests by phenylbutazone, ibuprofen, and hemin (as a site-I, site-II and site-III markers, respectively) considered that the site-III of BSA is the most possible binding site for Dy(III)-complex. In addition, Dy(III) complex was concurrently screened for its antimicrobial activities. The presented data provide a promising platform for the development of novel metal complexes that target nucleic acids and proteins with antimicrobial activity.Communicated by Ramaswamy H. Sarma.
在这项研究中,通过实验和理论方法研究了一种新型金属配合物[Dy(bpy)Cl.OH](bpy 是 2,2'-联吡啶)与鱼类鲑鱼 DNA(FS-DNA)和牛血清白蛋白(BSA)的相互作用。所有结果表明,Dy(III)配合物与 FS-DNA 和 BSA 之间存在显著的结合。在不同温度下获得了结合常数()、Dy(III)-配合物与 FS-DNA 和 BSA 的 Stern-Volmer 猝灭常数()以及使用范特霍夫方程的热力学参数。吸收、离子强度、碘离子猝灭、溴化乙锭(EtBr)猝灭研究以及正 Δ˚ 和 Δ˚ 的实验结果表明,疏水性沟结合模式在 Dy(III)-配合物与 FS-DNA 的结合中起主要作用。事实上,DNA 结合的分子对接结果与实验数据一致。此外,实验和分子建模结果表明,Dy(III)配合物与 BSA 结合是通过范德华相互作用。此外,苯并噻唑酮、布洛芬和血红素(分别作为位点 I、位点 II 和位点 III 标记物)的竞争测试结果表明,BSA 的位点 III 是 Dy(III)-配合物最有可能的结合位点。此外,还对 Dy(III)配合物进行了抗菌活性筛选。提供的数据为开发具有抗菌活性的靶向核酸和蛋白质的新型金属配合物提供了有希望的平台。由 Ramaswamy H. Sarma 传达。