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加权基因共表达网络分析探索人类伏隔核中海洛因成瘾的机制。

Weighted gene co-expression network analysis to explore the mechanism of heroin addiction in human nucleus accumbens.

机构信息

Key Laboratory of Environment and Genes Related to Diseases, Xi'an Jiaotong University, Ministry of Education, Xi'an, China.

College of Forensic Science, Key Laboratory of Public Health for Forensic Science, Xi'an Jiaotong University, Xi'an, China.

出版信息

J Cell Biochem. 2020 Feb;121(2):1870-1879. doi: 10.1002/jcb.29422. Epub 2019 Nov 6.

Abstract

Heroin dependence is a complex behavioral disease, and a chronic encephalopathy with the important feature of relapse. The purpose of the study was to identify the regulatory mechanism of the nucleus accumbens (NAc) in heroin dependence. We used weighted gene co-expression network analysis to analyze the GSE87823 data package, which included 27 heroin users and 22 controls of human NAc tissue. Modules were correlated with basic information of samples and enrichment analyses used to identify biological function and transcription factors and online tools were used to perform the gene ontology of significant genes. We identified one gene module from the total data (blue) and the male data (turquoise), respectively. The overlap genes of top 10 hub genes in significant modules (PRR11, SLC35E1, LPP, ZNF721, ZNF611, LRRFIP1) were selected to identify as candidate genes in the regulation mechanism of NAc in heroin dependence. Then, we accorded the results to further explore that miRNA-hsa-miR-155-5p in male and total may be a potential marker. The candidate genes may serve as novel prognostic markers and treatment targets. Hsa-miR-155-5p may be a promising regulatory point for the treatment of heroin addiction.

摘要

海洛因依赖是一种复杂的行为性疾病,也是一种具有复发性特征的慢性脑病。本研究旨在确定伏隔核(NAc)在海洛因依赖中的调节机制。我们使用加权基因共表达网络分析方法对 GSE87823 数据集进行分析,该数据集包含 27 名海洛因使用者和 22 名正常人的 NAc 组织样本。通过模块与样本基本信息的相关性分析,进行生物功能和转录因子的富集分析,并使用在线工具对显著基因进行基因本体分析。我们分别从总数据(蓝色)和男性数据(绿松石色)中确定了一个基因模块。选择显著模块中前 10 个枢纽基因(PRR11、SLC35E1、LPP、ZNF721、ZNF611、LRRFIP1)的重叠基因作为 NAc 调节机制中候选基因的鉴定。然后,我们根据结果进一步探讨了男性和总样本中 hsa-miR-155-5p 可能是一个潜在的标志物。候选基因可能作为新型预后标志物和治疗靶点。hsa-miR-155-5p 可能是治疗海洛因成瘾的一个有前途的调控点。

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