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同一水貂养殖户来源的两株产 MCR-1 大肠杆菌的发生和基因组特征

Occurrence and Genomic Characterization of Two MCR-1-Producing Escherichia coli Isolates from the Same Mink Farmer.

机构信息

Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China.

Department of Respiratory Medicine, Lihuili Hospital, Ningbo Medical Center, Ningbo, China.

出版信息

mSphere. 2019 Nov 6;4(6):e00602-19. doi: 10.1128/mSphere.00602-19.

Abstract

The spread of colistin resistance gene at the animal-human interface remains largely unknown. This work aimed to investigate the molecular characteristics of two extended-spectrum-β-lactamase (ESBL)-producing strains with , i.e., strains H8 and H9, isolated from the same mink farmer. In this study, five positive strains were isolated from the mink farm. Pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) identified two genetically unrelated MCR-1 producers (H8 and H9) from the same farmer and two clonally related MCR-1-positive isolates (M5 and M6) from two different mink samples. Additionally, a variant, designated , was identified in isolate M4. MIC determination revealed that all of the MCR-producing strains exhibited multiresistant phenotypes but showed susceptibility to imipenem, meropenem, amikacin, and tigecycline. Replicon typing showed that was associated with IncHI2 plasmids in 4 cases, while the gene was located on an IncI2 plasmid in 1 case. PacBio sequencing and plasmid analysis confirmed that the - gene was located on an ∼204-kb IncHI2 plasmid in H8 and was carried by an ∼61-kb IncI2 plasmid in H9. To our knowledge, this work represents the first report of the occurrence of MCR-producing isolates from mink. Moreover, our report also describes the coexistence of two different MCR-1 producers in the same farmer. It highlights that fur farms can be reservoirs of genes. The identification of -carrying plasmids on a fur farm is of potential public health importance, as it suggests that is widespread in the animal husbandry industry. Colistin resistance is a real threat for both human and animal health. The mobile colistin resistance gene has contributed to the persistence and transmission of colistin resistance at the interfaces of animals, humans, and ecosystems. Although genes have usually been recovered from food animals, patients, and healthy humans, transmission of genes at the animal-human interface remains largely unknown. This was the first study to isolate and characterize MCR-producing isolates from mink, as well as to report the coexistence of two different MCR-1 producers in the same farmer. The characterization and analysis of two MCR-1-producing isolates may have important implications for comprehension of the transmission dynamics of these bacteria. We emphasize the importance of improved multisectorial surveillance of colistin-resistant in this region.

摘要

在人兽界面,黏菌素耐药基因的传播情况在很大程度上仍不为人知。本研究旨在调查两株产超广谱β-内酰胺酶(ESBL)的 菌株的分子特征,即来自同一位水貂养殖者的菌株 H8 和 H9。在本研究中,从水貂养殖场中分离出了 5 株阳性 菌株。脉冲场凝胶电泳(PFGE)和多位点序列分型(MLST)鉴定出来自同一位养殖者的两株遗传上不相关的 MCR-1 产生菌(H8 和 H9)和两株来自不同水貂样本的克隆相关的 MCR-1 阳性分离株(M5 和 M6)。此外,在分离株 M4 中鉴定出一种 变异体,命名为 。药敏试验结果显示,所有产 MCR 的菌株均表现出多药耐药表型,但对亚胺培南、美罗培南、阿米卡星和替加环素敏感。复制子分型显示,4 株菌的 基因与 IncHI2 质粒相关,而 1 株菌的 基因位于 IncI2 质粒上。PacBio 测序和质粒分析证实,H8 中的 基因位于一个约 204kb 的 IncHI2 质粒上,而 H9 中的 基因位于一个约 61kb 的 IncI2 质粒上。据我们所知,这是首次从水貂中分离出产 MCR 的分离株。此外,我们的报告还描述了同一养殖者中两种不同 MCR-1 产生菌的共存。这表明毛皮养殖场可能是 基因的储存库。在毛皮养殖场中发现携带 的质粒具有潜在的公共卫生重要性,因为这表明 在畜牧业中广泛存在。黏菌素耐药是人类和动物健康的真正威胁。移动黏菌素耐药基因 导致了动物、人类和生态系统之间黏菌素耐药的持续存在和传播。尽管 基因通常从食用动物、患者和健康人群中回收,但在人兽界面, 基因的传播情况在很大程度上仍不为人知。这是首次从水貂中分离和鉴定产 MCR 的分离株,并报告同一养殖者中两种不同 MCR-1 产生菌的共存。对两株产 MCR-1 的 分离株的特征和分析可能对理解这些细菌的传播动力学具有重要意义。我们强调了在该地区加强对该地区耐黏菌素 的多部门监测的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1994/6835210/32fcc504f28d/mSphere.00602-19-f0001.jpg

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