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取代的二硝基苯胺形成的反应性指数的研究及其与恶性疟原虫α-微管蛋白对接的相关性。

Investigation of the reactivity indices for the formation of substituted dinitroanilines and correlations to their dockings on α-tubulin of Plasmodium falciparum.

机构信息

Department of Chemistry, University of Lagos, Akoka, Lagos, Nigeria.

Computational Chemistry Group, Department of Chemistry, Faculty of Science, University of Mauritius, Réduit, 80837, Mauritius.

出版信息

J Mol Model. 2019 Nov 12;25(11):342. doi: 10.1007/s00894-019-4169-2.

Abstract

The local and global reactivity descriptors of substituted dinitroaniline analogues were investigated using M06-2X/6-31 + G(d,p) method. It was observed that NH (m = 3.53 eV; p = 3.70 eV) substituent conveyed the highest nucleophilic character on the benzene ring system than the other groups under study. For the substrates 4-substituted-1-chloro-2,6-dinitrobenzenes, the condensed to atom electrophilicity ([Formula: see text]) increases in the order COOCH > NO > F > SOH > CN > Cl > Br. The para substituted groups with the halogens follow the order of increasing electronegativity, F > Cl > Br. However, the nucleophilicity of the halo substituents of the products increases in the order, F > Br > Cl. Molecular docking simulations using the homology model with the crystallographic structure of zinc-induced bovine tubulin heterodimer (1JFF) as one of the templates reveal that the interactions between the tubulins of Plasmodium falciparum and dinitroaniline analogues are due to H-bonding. In general, the binding interaction is with the following residues: Met137, ARG64, Lys60, Glu183, Val4, His28, Cys171, Tyr224, Asn206, 228, Ile235, and Leu238. The pKs of the residue decrease as the ring activating power of the substituents increases from strongly activating to weakly activating groups. There is no evidence of intra or intermolecular H-bonding between Arg64 and Cys171. Electronegativity (χ) gives a better generic description of the dinitroanilines than any other parameters considered. Short-range hydrophobic interaction contributes to reduced binding affinities of the ligands. Graphical abstractReaction of substituted 2,6-dinitro chlorobenzene with diisopropylamine. Orbital interaction between the substrates and diisopropylamine in the formation of the dinitroanilines.

摘要

使用 M06-2X/6-31 + G(d,p) 方法研究了取代的二硝基苯胺类似物的局部和全局反应性描述符。结果表明,与研究中的其他基团相比,NH(m = 3.53 eV;p = 3.70 eV)取代基在苯环系统上表现出最高的亲核性。对于取代基为 4-取代-1-氯-2,6-二硝基苯的底物,缩合原子电负性([Formula: see text])增加的顺序为 COOCH > NO > F > SOH > CN > Cl > Br。带有卤素的对位取代基遵循电负性增加的顺序,F > Cl > Br。然而,产物中卤素取代基的亲核性增加的顺序为 F > Br > Cl。使用同源模型与锌诱导的牛微管蛋白二聚体(1JFF)的晶体结构之一作为模板的分子对接模拟表明,恶性疟原虫微管蛋白与二硝基苯胺类似物之间的相互作用是由于氢键。一般来说,结合相互作用与以下残基有关:Met137、ARG64、Lys60、Glu183、Val4、His28、Cys171、Tyr224、Asn206、228、Ile235 和 Leu238。随着取代基的环活化能力从强活化基团变为弱活化基团,残基的 pKs 值降低。没有证据表明 Arg64 和 Cys171 之间存在内或分子间氢键。电负性(χ)比考虑的任何其他参数都能更好地描述二硝基苯胺。短程疏水性相互作用导致配体结合亲和力降低。

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