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使用多参数全局敏感性分析确定趋化因子触发的T淋巴细胞停滞动力学中的关键途径和成分。

Identifying Key Pathways and Components in Chemokine-Triggered T Lymphocyte Arrest Dynamics Using a Multi-Parametric Global Sensitivity Analysis.

作者信息

Lee Dooyoung, Beste Michael T, Anderson Nicholas R, Koretzky Gary A, Hammer Daniel A

机构信息

Department of Bioengineering, University of Pennsylvania, 240 Skirkanich Hall, 210 South 33rd St., Philadelphia, PA 19104 USA.

Present Address: Morphic Therapeutic, Waltham, MA 02451 USA.

出版信息

Cell Mol Bioeng. 2019 May 29;12(3):193-202. doi: 10.1007/s12195-019-00575-2. eCollection 2019 Jun.

Abstract

INTRODUCTION

The arrest of rolling T lymphocytes at specific locations is crucial to proper immune response function. We previously developed a model of chemokine-driven integrin activation, termed integrative signaling adhesive dynamics (ISAD). In addition, we have shown that loss of diacylglycerol kinase (DGK) leads to a gain of function regarding adhesion under shear flow. We undertook this study to understand the sensitivity of adhesion to perturbations in other signaling molecules.

METHODS

We adapted multi-parametric sensitivity analysis (MPSA) for use in our ISAD model to identify important parameters, including initial protein concentrations and kinetic rate constants, for T lymphocyte arrest. We also compared MPSA results to those obtained from a single parametric sensitivity analysis.

RESULTS

In addition to the previously shown importance of DGK in lymphocyte arrest, PIP cleavage and Rap1 activation are crucial in determining T cell arrest dynamics, which agree with previous experimental findings. The l-selectin density on the T lymphocyte surface also plays a large role in determining the distance rolled before arrest. Both the MPSA and single-parametric method returned similar results regarding the most sensitive kinetic rate constants.

CONCLUSION

We show here that the regulation of the amount of second messengers are, in general, more critical for determining T lymphocyte arrest over the initial signaling proteins, highlighting the importance of amplification of signaling in cell adhesion responses. Overall, this work provides a mechanistic insight of the contribution of key pathways and components, thus may help to identify potential therapeutic targets for drug development against immune disorders.

摘要

引言

滚动的T淋巴细胞在特定位置的捕获对于正常免疫反应功能至关重要。我们之前开发了一种趋化因子驱动的整合素激活模型,称为整合信号黏附动力学(ISAD)。此外,我们已经表明,二酰基甘油激酶(DGK)的缺失会导致在剪切流下黏附功能的增强。我们进行这项研究以了解黏附对其他信号分子扰动的敏感性。

方法

我们将多参数敏感性分析(MPSA)应用于我们的ISAD模型,以确定T淋巴细胞捕获的重要参数,包括初始蛋白质浓度和动力学速率常数。我们还将MPSA结果与从单参数敏感性分析获得的结果进行了比较。

结果

除了之前显示的DGK在淋巴细胞捕获中的重要性外,磷脂酰肌醇-4,5-二磷酸(PIP)的裂解和Rap1的激活在决定T细胞捕获动力学方面至关重要,这与之前的实验结果一致。T淋巴细胞表面的L-选择素密度在决定捕获前滚动的距离方面也起着很大作用。关于最敏感的动力学速率常数,MPSA和单参数方法都得出了相似的结果。

结论

我们在此表明,一般而言,第二信使数量的调节对于决定T淋巴细胞捕获比初始信号蛋白更为关键,突出了信号放大在细胞黏附反应中的重要性。总体而言,这项工作提供了对关键途径和成分贡献的机制性见解,因此可能有助于识别针对免疫疾病药物开发的潜在治疗靶点。

相似文献

本文引用的文献

1
Mechanical regulation of T-cell functions.T 细胞功能的机械调节。
Immunol Rev. 2013 Nov;256(1):160-76. doi: 10.1111/imr.12122.
4
Chemokines and the signaling modules regulating integrin affinity.趋化因子和调节整合素亲和力的信号模块。
Front Immunol. 2012 May 25;3:127. doi: 10.3389/fimmu.2012.00127. eCollection 2012.

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