Department of Pathology, Copenhagen University Hospital, Copenhagen, Denmark
Department of Pathology, Copenhagen University Hospital, Copenhagen, Denmark.
J Clin Microbiol. 2020 Jan 28;58(2). doi: 10.1128/JCM.01518-19.
The idation of HPV otyping ests (VALGENT) framework is an international cooperation designed to evaluate human papillomavirus (HPV) assays with genotyping capabilities. Here, we assessed the performance of the BD Onclarity assay using Danish SurePath cervical screening samples collected under the fourth VALGENT installment, consisting of 998 consecutive samples from a screening population and 297 enriched samples with abnormal cytology (100 with atypical squamous cells of undetermined significance [ASCUS], 100 with low-grade squamous intraepithelial lesions [LSIL], and 97 with high-grade squamous intraepithelial lesions [HSIL]). The Onclarity assay detects six HPV genotypes individually (genotypes 16, 18, 31, 45, 51, and 52) and eight genotypes in three bulks (genotypes 33 and 58; genotypes 56, 59, and 66; and genotypes 35, 39, and 68). The clinical performance of the Onclarity assay for the detection of cervical intraepithelial neoplasia of grade 2 or worse (≥CIN2) and of two consecutive cytology outcomes negative for intraepithelial lesion or malignancy (2×NILM) was assessed relative to that of the GP5+/6+ PCR-enzyme immunoassay (GP-EIA) by a noninferiority test. The relative sensitivity for ≥CIN2 was 1.00 (95% confidence interval [CI], 0.97 to 1.04), and the relative specificity for 2×NILM was 1.04 (95% CI, 1.02 to 1.06). The Onclarity assay was found to be noninferior to the GP-EIA in terms of both sensitivity ( = 0.0006) and specificity ( < 0.0001). The type-specific performance of the Onclarity assay was also assessed, using the GP5+/6+ PCR with Luminex genotyping (GP-LMNX) as the comparator. The Onclarity assay showed good concordance for almost all HPV genotype groups. A stability analysis of SurePath samples was also performed, where a SurePath aliquot was stored refrigerated for 7 months and the internal control of the Onclarity assay was used as a marker for cellularity. The threshold cycle ( ) value was the same (24.8) in the first and second Onclarity runs, showing that a SurePath sample can be stored refrigerated for 7 months and still remain a valid test specimen.
HPV 分型检测评估(VALGENT)框架是一项国际合作,旨在评估具有基因分型能力的人乳头瘤病毒(HPV)检测。在这里,我们使用丹麦 SurePath 宫颈筛查样本评估了 BD Onclarity 检测的性能,这些样本是在第四轮 VALGENT 中收集的,包括来自筛查人群的 998 个连续样本和 297 个异常细胞学富集样本(100 个非典型鳞状细胞意义不明确[ASCUS],100 个低级别鳞状上皮内病变[LSIL]和 97 个高级别鳞状上皮内病变[HSIL])。Onclarity 检测单独检测六种 HPV 基因型(基因型 16、18、31、45、51 和 52),并在三个批次中检测八种基因型(基因型 33 和 58;基因型 56、59 和 66;和基因型 35、39 和 68)。通过非劣效性检验,评估了 Onclarity 检测对宫颈上皮内瘤变 2 级或更高级别(≥CIN2)和连续两次细胞学结果为上皮内病变或恶性肿瘤阴性(2×NILM)的临床性能,与 GP5+/6+PCR-酶免疫测定(GP-EIA)进行比较。≥CIN2 的相对敏感性为 1.00(95%置信区间[CI],0.97 至 1.04),2×NILM 的相对特异性为 1.04(95%CI,1.02 至 1.06)。Onclarity 检测在敏感性(=0.0006)和特异性(<0.0001)方面均不劣于 GP-EIA。还使用 GP5+/6+PCR 与 Luminex 基因分型(GP-LMNX)作为比较,评估了 Onclarity 检测的 HPV 型特异性性能。Onclarity 检测对几乎所有 HPV 基因型组的一致性都很好。还对 SurePath 样本进行了稳定性分析,其中将 SurePath 等分试样冷藏保存 7 个月,并将 Onclarity 检测的内参用作细胞计数的标志物。第一个和第二个 Onclarity 运行的阈值循环( )值相同(24.8),表明 SurePath 样本可以冷藏保存 7 个月,仍然是有效的测试标本。