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敲除 导致细胞周期、转录和发育相关基因的表达发生改变。

Depletion of Results in Altered Expression of Genes Involved in Regulation of the Cell Cycle, Transcription, and Development in .

机构信息

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstrasse 3, D-06466 Seeland, Germany.

Institute of Experimental Botany, Czech Acad Sci, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Šlechtitelů 31, CZ-77900 Olomouc, Czech Republic.

出版信息

Int J Mol Sci. 2019 Nov 15;20(22):5726. doi: 10.3390/ijms20225726.

Abstract

Centromeres contain specialized nucleosomes at which histone H3 is partially replaced by the centromeric histone H3 variant cenH3 that is required for the assembly, maintenance, and proper function of kinetochores during mitotic and meiotic divisions. Previously, we identified a KINETOCHORE NULL 2 (KNL2) of that is involved in the licensing of centromeres for the cenH3 recruitment. We also demonstrated that a knockout mutant for KNL2 shows mitotic and meiotic defects, slower development, reduced growth rate, and fertility. To analyze an effect of mutation on global gene transcription of we performed RNA-sequencing experiments using seedling and flower bud tissues of and wild-type plants. The transcriptome data analysis revealed a high number of differentially expressed genes (DEGs) in plants. The set was enriched in genes involved in the regulation of the cell cycle, transcription, development, and DNA damage repair. In addition to comprehensive information regarding the effects of mutation on the global gene expression, physiological changes in plants are also presented, which provides an integrated understanding of the critical role played by KNL2 in plant growth and development.

摘要

着丝粒包含专门的核小体,组蛋白 H3 在那里被着丝粒组蛋白 H3 变体 cenH3 部分取代,cenH3 对于有丝分裂和减数分裂期间动粒的组装、维持和正常功能是必需的。此前,我们鉴定了一个参与着丝粒 cenH3 募集许可的 的 KINETOCHORE NULL 2 (KNL2)。我们还证明了 KNL2 的敲除突变体表现出有丝分裂和减数分裂缺陷、发育缓慢、生长速度降低和生育力下降。为了分析 突变对 的全局基因转录的影响,我们使用 和野生型植物的幼苗和花蕾组织进行了 RNA-seq 实验。转录组数据分析显示,突变体植物中有大量差异表达基因 (DEGs)。该集富含参与细胞周期、转录、发育和 DNA 损伤修复调控的基因。除了关于 突变对全局基因表达影响的综合信息外,还呈现了植物的生理变化,这为 KNL2 在植物生长和发育中的关键作用提供了综合理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be32/6888302/513e020e5c9a/ijms-20-05726-g001.jpg

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