Saville James W, Troman Luca A, Duong Van Hoa Franck
Department of Biochemistry, University of British Columbia.
School of Biochemistry, University of Bristol.
J Vis Exp. 2019 Nov 2(153). doi: 10.3791/60661.
Membrane proteins, including transporters, channels, and receptors, constitute nearly one-fourth of the cellular proteome and over half of current drug targets. Yet, a major barrier to their characterization and exploitation in academic or industrial settings is that most biochemical, biophysical, and drug screening strategies require these proteins to be in a water-soluble state. Our laboratory recently developed the peptidisc, a membrane mimetic offering a "one-size-fits-all" approach to the problem of membrane protein solubility. We present here a streamlined protocol that combines protein purification and peptidisc reconstitution in a single chromatographic step. This workflow, termed PeptiQuick, allows for bypassing dialysis and incubation with polystyrene beads, thereby greatly reducing exposure to detergent, protein denaturation, and sample loss. When PeptiQuick is performed with biotinylated scaffolds, the preparation can be directly attached to streptavidin-coated surfaces. There is no need to biotinylate or modify the membrane protein target. PeptiQuick is showcased here with the membrane receptor FhuA and antimicrobial ligand colicin M, using biolayer interferometry to determine the precise kinetics of their interaction. It is concluded that PeptiQuick is a convenient way to prepare and analyze membrane protein-ligand interactions within one day in a detergent-free environment.
膜蛋白,包括转运蛋白、通道蛋白和受体,构成了细胞蛋白质组的近四分之一以及目前超过一半的药物靶点。然而,在学术或工业环境中对其进行表征和开发的一个主要障碍是,大多数生化、生物物理和药物筛选策略都要求这些蛋白处于水溶性状态。我们实验室最近开发了肽盘,这是一种膜模拟物,为膜蛋白溶解性问题提供了一种“一刀切”的方法。我们在此展示一种简化方案,该方案在单个色谱步骤中结合了蛋白质纯化和肽盘重构。这种工作流程,称为PeptiQuick,允许绕过透析和与聚苯乙烯珠的孵育,从而大大减少了与去污剂的接触、蛋白质变性和样品损失。当使用生物素化支架进行PeptiQuick时,制备物可以直接连接到链霉亲和素包被的表面。无需对膜蛋白靶点进行生物素化或修饰。本文使用生物膜干涉术来确定膜受体FhuA和抗菌配体大肠杆菌素M相互作用的精确动力学,以此展示PeptiQuick。得出的结论是,PeptiQuick是在无去污剂环境中一天内制备和分析膜蛋白-配体相互作用的便捷方法。