State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, PR China.
Key Laboratory of Medical Microbiology and Parasitology & Key Laboratory of Environmental Pollution Monitoring and Disease Control, Ministry of Education, Talent Base of Microbiology and Human health of Guizhou Province, School of Basic Medical Sciences, Guizhou Medical University, Guiyang, 550025, PR China.
Int J Syst Evol Microbiol. 2020 Feb;70(2):1048-1054. doi: 10.1099/ijsem.0.003870.
Two Gram-positive, rod-shaped, motile, endospore-forming strains, SYSU K30003 and SYSU K30004, were isolated from cave soil sampled in Xingyi County, Guizhou Province, south-west PR China. The 16S rRNA gene sequence results indicated that strains SYSU K30003 and SYSU K30004 had highest sequence similarities to DSM 26310 (93.2 %) and KCTC 33185 (97.8 %), respectively. Optimum growth for both strains occurred at pH 7.0 and 37 °C. Both strains contained -2,6-diaminopimelic acid in their cell-wall peptidoglycan and MK-7 was the only isoprenoid quinone detected. The polar lipid profile of strain SYSU K30004 consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, two aminophospholipids, an unidentified glycolipid, unidentified phospholipids and two unidentified polar lipids. The polar lipid profile of strain SYSU K30003 contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and an unidentified glycolipid. The major fatty acids (>5 %) of strain SYSU K30003 were anteiso-C C, anteiso-C and iso-C, while those of strain SYSU K30004 were anteiso-C, C, anteiso-C, iso-C, iso-C and iso-C. The genome G+C contents of strains SYSU K30003 and SYSU K30004 were 59.0 and 53.6 mol%, respectively. The average nucleotide identity values between strains SYSU K30003 and SYSU K30004 and other closely related members were below the cut-off level (95-96 %) for species identification. Based on the results of phenotypic, chemotaxonomic and genome analyses, strains SYSU K30003 and SYSU K30004 represent two novel species of the genus , for which the names sp. nov. and sp. nov. are proposed. The type strains are SYSU K30003 (=KCTC 33956=CGMCC 1.13505) and SYSU K30004 (=KCTC 33957=CGMCC 1.13872).
两株革兰氏阳性、杆状、能动、产芽孢的菌株 SYSU K30003 和 SYSU K30004 从中国西南部贵州省兴义县洞穴土壤中分离出来。16S rRNA 基因序列结果表明,菌株 SYSU K30003 和 SYSU K30004 与 DSM 26310(93.2%)和 KCTC 33185(97.8%)的序列相似度最高。两株菌的最佳生长 pH 值均为 7.0,最佳生长温度均为 37°C。两株菌的细胞壁肽聚糖中均含有 -2,6-二氨基庚二酸,且仅检测到 MK-7 为唯一的异戊烯醌。菌株 SYSU K30004 的极性脂谱由二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、两种氨基磷脂、一种未知糖脂、未知磷脂和两种未知极性脂组成。菌株 SYSU K30003 的极性脂谱含有二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和一种未知糖脂。菌株 SYSU K30003 的主要脂肪酸(>5%)为 anteiso-C C、anteiso-C 和 iso-C,而菌株 SYSU K30004 的主要脂肪酸为 anteiso-C、C、anteiso-C、iso-C、iso-C 和 iso-C。菌株 SYSU K30003 和 SYSU K30004 的基因组 G+C 含量分别为 59.0 和 53.6mol%。菌株 SYSU K30003 和 SYSU K30004 与其他密切相关成员之间的平均核苷酸同一性值低于种间识别的截止值(95-96%)。基于表型、化学分类和基因组分析的结果,菌株 SYSU K30003 和 SYSU K30004 代表 属的两个新种,分别提议使用新种名 sp. nov. 和 sp. nov.。其模式菌株分别为 SYSU K30003(=KCTC 33956=CGMCC 1.13505)和 SYSU K30004(=KCTC 33957=CGMCC 1.13872)。