Dai Xingli, Shi Kaixiang, Wang Xin, Fan Jun, Wang Rui, Zheng Shixue, Wang Gejiao
1State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China.
2Tobacco Company of Enshi, Hubei Province, Enshi, Hubei 445000, PR China.
Int J Syst Evol Microbiol. 2019 Jan;69(1):183-188. doi: 10.1099/ijsem.0.003125. Epub 2018 Nov 21.
Strain DXL2, a Gram-stain-negative, rod-shaped, endospore-forming, motile, aerobic bacterium, was isolated from selenium mineral soil. DXL2 had the highest 16S rRNA gene sequence similarities with those of Paenibacillus ginsengarviGsoil 139 (96.8 %), Paenibacillushemerocallicola DLE-12 (95.5 %) and Paenibacillus hodogayensisSG (95.4 %). The genome size of DXL2 was 7.24 Mb, containing 6243 predicted protein-coding genes, with a DNA G+C content of 60.2 mol%. DXL2 contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The major cellular fatty acids were anteiso-C15 : 0, iso-C16 : 0 and iso-C15 : 0. The major quinone was menaquinone 7. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, two aminophospholipids, an unidentified aminolipid, phosphatidylmethylethanolamine, an unidentified glycolipid and an unidentified phospholipid. Compared with the other strains, DXL2 had a specific phospholipid and a specific aminolipid, it hydrolyzed Tween 40 and could not assimilate potassium gluconate. On the basis of the phenotypic, chemotaxonomic and phylogenetic results, strain DXL2 represents a novel species within the genus Paenibacillus, for which the name Paenibacillusflagellatus sp. nov. is proposed. The type strain is DXL2 (=KCTC 33976=CCTCC AB 2018054).
菌株DXL2是一种革兰氏阴性、杆状、产芽孢、具运动性的需氧细菌,从含硒矿土中分离得到。DXL2的16S rRNA基因序列与人参芽孢杆菌Gsoil 139(96.8%)、萱草芽孢杆菌DLE-12(95.5%)和保土芽孢杆菌SG(95.4%)的序列相似度最高。DXL2的基因组大小为7.24 Mb,包含6243个预测的蛋白质编码基因,DNA G+C含量为60.2 mol%。DXL2在细胞壁肽聚糖中含有内消旋二氨基庚二酸。主要细胞脂肪酸为anteiso-C15 : 0、iso-C16 : 0和iso-C15 : 0。主要醌类为甲基萘醌7。极性脂质为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油、两种氨基磷脂、一种未鉴定的氨基脂质、磷脂酰甲基乙醇胺、一种未鉴定的糖脂和一种未鉴定的磷脂。与其他菌株相比,DXL2有特定的磷脂和特定的氨基脂质,能水解吐温40且不能同化葡萄糖酸钾。基于表型、化学分类和系统发育结果,菌株DXL2代表芽孢杆菌属内的一个新物种,为此提出名为Paenibacillusflagellatus sp. nov.的新名称。模式菌株为DXL2(=KCTC 33976=CCTCC AB 2018054)。