Feng Er-Cui, Jiang Li
Biological Science and Medical Engineering School, Southeast University, Nanjing 210018, China.
Zhongguo Dang Dai Er Ke Za Zhi. 2019 Nov;21(11):1116-1123. doi: 10.7499/j.issn.1008-8830.2019.11.012.
To observe differential peptidomics in the hippocampal tissue in a rat model of premature white matter injury, and to investigate the mechanism of premature white matter injury.
Twenty neonatal Sprague-Dawley rats were randomly and equally divided into a control group and a model group. Rats in the model group underwent permanent ligation of the right common carotid artery 2 days after birth, followed by 2 hours of hypoxia. For rats in the control group, the right common carotid artery was isolated, but without ligation and hypoxia. Brain tissue samples were collected from the two groups, and hippocampal tissue was isolated. Liquid chromatography-tandem mass spectrometry combined with tandem mass spectrometry was used for peptidomic profiling of hippocampal tissue, and the differentially expressed peptides between the two groups were subjected to bioinformatics analysis to assess their possible roles in neural development and function.
A total of 4164 peptides were identified and quantified, and 262 of them were differentially expressed (absolute fold change ≥2.5), including 164 upregulated peptides and 98 downregulated peptides. The numbers of differentially expressed peptides of the precursor proteins ELN, PCLO, MYO15a, MAP4, and MAP1b were the most, and may play significant roles in the pathogenesis of premature white matter injury. CDK5 signaling pathway in the hippocampus was activated in the rat model of premature white matter injury.
The differentially expressed peptides related to precursor proteins such as MAP1b may be key bioactive peptides involved in neural development and function in premature white matter injury, and activation of the CDK5 signaling pathway may be associated with premature white matter injury.
观察早产儿脑白质损伤大鼠模型海马组织中的差异肽组学,探讨早产儿脑白质损伤的机制。
将20只新生Sprague-Dawley大鼠随机等分为对照组和模型组。模型组大鼠出生后2天进行右侧颈总动脉永久性结扎,随后进行2小时缺氧处理。对照组大鼠分离右侧颈总动脉,但不进行结扎和缺氧处理。收集两组脑组织样本,分离海马组织。采用液相色谱-串联质谱联用技术对海马组织进行肽组学分析,并对两组间差异表达的肽进行生物信息学分析,以评估其在神经发育和功能中的可能作用。
共鉴定和定量了4164种肽,其中262种差异表达(绝对变化倍数≥2.5),包括164种上调肽和98种下调肽。前体蛋白ELN、PCLO、MYO15a、MAP4和MAP1b的差异表达肽数量最多,可能在早产儿脑白质损伤的发病机制中起重要作用。早产儿脑白质损伤大鼠模型海马中的CDK5信号通路被激活。
与MAP1b等前体蛋白相关的差异表达肽可能是参与早产儿脑白质损伤神经发育和功能的关键生物活性肽,CDK5信号通路的激活可能与早产儿脑白质损伤有关。