Rubio-Carrasquilla Marcela, Ochoa Rodrigo, Santa Cristian, Guimarães Allan J, Cano Luz Elena, Moreno Ernesto
Grupo de Micología Médica y Experimental, Corporación para Investigaciones Biológicas (CIB), Medellín, Colombia; Instituto de Biología, Universidad de Antioquia, Medellín, Colombia.
Programa de Estudio y Control de Enfermedades Tropicales - PECET, Universidad de Antioquia, Medellín, Colombia.
Rev Iberoam Micol. 2019 Oct-Dec;36(4):186-191. doi: 10.1016/j.riam.2019.06.002. Epub 2019 Nov 19.
In a previous work we showed the feasibility of an interferon gamma release assay (IGRA) for detecting latent infection by Histoplasma capsulatum. While in that proof-of-concept study we used crude fungal extracts as antigens, the newest IGRAs developed for other infections are based on molecularly defined antigens, mostly on mixtures of immunogenic peptides.
To identify proteins in H. capsulatum that might serve as molecularly defined antigens for an IGRA test.
We surveyed the literature looking for known H. capsulatum-immunogenic proteins and assayed two of them as antigens in an IGRA test, in a study that involved 80 volunteers. Furthermore, we used several bioinformatics tools to identify specific H. capsulatum proteins and to analyze possible strategies for the design of H. capsulatum-specific immunogenic peptides.
Seven H. capsulatum-immunogenic proteins were retrieved from the literature. IGRA tests using either the heat shock protein 60 or the M antigen showed high sensitivities but low specificities, most likely due to the high sequence similarity with the corresponding orthologs in other pathogenic microorganisms. We identified around 2000 H. capsulatum-specific proteins, most of which remain unannotated. Class II T-cell epitope predictions for a small number of these proteins showed a great variability among different alleles, prompting for a "brute force" approach for peptide design.
The H. capsulatum genome encodes a large number of distinctive proteins, which represent a valuable source of potential specific antigens for an IGRA test. Among them, the Cfp4 protein stands out as a very attractive candidate.
在之前的一项研究中,我们展示了干扰素γ释放试验(IGRA)检测荚膜组织胞浆菌潜伏感染的可行性。在该概念验证研究中,我们使用粗制真菌提取物作为抗原,而针对其他感染开发的最新IGRA基于分子定义的抗原,主要是免疫原性肽的混合物。
鉴定荚膜组织胞浆菌中可能用作IGRA检测分子定义抗原的蛋白质。
我们查阅文献寻找已知的荚膜组织胞浆菌免疫原性蛋白,并在一项涉及80名志愿者的研究中,将其中两种蛋白作为抗原进行IGRA检测。此外,我们使用了几种生物信息学工具来鉴定荚膜组织胞浆菌特异性蛋白,并分析设计荚膜组织胞浆菌特异性免疫原性肽的可能策略。
从文献中检索到7种荚膜组织胞浆菌免疫原性蛋白。使用热休克蛋白60或M抗原进行的IGRA检测显示出高敏感性但低特异性,这很可能是由于与其他致病微生物中相应直系同源物的序列相似性较高。我们鉴定出约2000种荚膜组织胞浆菌特异性蛋白,其中大多数仍未注释。对少数这些蛋白的II类T细胞表位预测显示不同等位基因之间存在很大差异,这促使采用“强力”方法进行肽设计。
荚膜组织胞浆菌基因组编码大量独特的蛋白质,它们是IGRA检测潜在特异性抗原的宝贵来源。其中,Cfp4蛋白是一个非常有吸引力的候选者。