Biomedical Data Science, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
Molecular & Systems Biology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire, United States of America.
PLoS One. 2019 Nov 25;14(11):e0224137. doi: 10.1371/journal.pone.0224137. eCollection 2019.
Although synergy is a pillar of modern pharmacology, toxicology, and medicine, there is no consensus on its definition despite its nearly one hundred-year history. Moreover, methods for statistical determination of synergy that account for variation of response to treatment are underdeveloped and if exist are reduced to the traditional t-test, but do not comply with the normal distribution assumption. We offer statistical models for estimation of synergy using an established definition of Bliss drugs' independence. Although Bliss definition is well-known, it remains a theoretical concept and has never been applied for statistical determination of synergy with various forms of treatment outcome. We rigorously and consistently extend the Bliss definition to detect statistically significant synergy under various designs: (1) in vitro, when the outcome of a cell culture experiment with replicates is the proportion of surviving cells for a single dose or multiple doses, (2) dose-response methodology, (3) in vivo studies in organisms, when the outcome is a longitudinal measurement such as tumor volume, and (4) clinical studies, when the outcome of treatment is measured by survival. For each design, we developed a specific statistical model and demonstrated how to test for independence, synergy, and antagonism, and compute the associated p-value.
虽然协同作用是现代药理学、毒理学和医学的一个重要支柱,但尽管其已有近百年的历史,却没有关于其定义的共识。此外,用于统计确定协同作用的方法,这些方法考虑了对治疗反应的变化,还不够发达,如果存在的话,也只是简化为传统的 t 检验,但不符合正态分布假设。我们提供了使用已建立的 Bliss 药物独立性定义来估计协同作用的统计模型。虽然 Bliss 定义是众所周知的,但它仍然是一个理论概念,从未应用于各种形式的治疗结果的协同作用的统计确定。我们严格而一致地扩展 Bliss 定义,以在各种设计下检测统计学上显著的协同作用:(1)在体外,当细胞培养实验的结果是单一剂量或多种剂量下存活细胞的比例时,(2)剂量反应方法,(3)在生物体的体内研究中,当结果是纵向测量(如肿瘤体积)时,以及(4)在临床试验中,当治疗结果通过生存来衡量时。对于每种设计,我们都开发了一个特定的统计模型,并演示了如何测试独立性、协同作用和拮抗作用,并计算了相关的 p 值。