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Genome Sequence Data of Lactobacillus ruminis ICIS-540, Isolated from the Intestine of a Healthy Woman.从一名健康女性肠道中分离出的瘤胃乳杆菌ICIS-540的基因组序列数据。
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本文引用的文献

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MicroRNA-223 Induced Repolarization of Peritoneal Macrophages Using CD44 Targeting Hyaluronic Acid Nanoparticles for Anti-Inflammatory Effects.利用靶向CD44的透明质酸纳米颗粒诱导微小RNA-223使腹膜巨噬细胞复极化以发挥抗炎作用。
PLoS One. 2016 May 5;11(5):e0152024. doi: 10.1371/journal.pone.0152024. eCollection 2016.
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Effects of bifidobacterial supplementation to pregnant women and infants in the prevention of allergy development in infants and on fecal microbiota.补充双歧杆菌对孕妇和婴儿预防婴儿过敏发生及对粪便微生物群的影响。
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Stool microbiota and vaccine responses of infants.婴儿的粪便微生物群与疫苗反应
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A fresh look at the hygiene hypothesis: how intestinal microbial exposure drives immune effector responses in atopic disease.重新审视卫生假说：肠道微生物暴露如何驱动特应性疾病中的免疫效应反应。
Semin Immunol. 2013 Nov 30;25(5):378-87. doi: 10.1016/j.smim.2013.09.003. Epub 2013 Oct 25.
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Bifidobacteria isolated from infants and cultured on human milk oligosaccharides affect intestinal epithelial function.从婴儿中分离出的双歧杆菌，在人乳寡糖上培养，会影响肠道上皮功能。
J Pediatr Gastroenterol Nutr. 2012 Sep;55(3):321-7. doi: 10.1097/MPG.0b013e31824fb899.
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Bifidobacteria can protect from enteropathogenic infection through production of acetate.双歧杆菌可以通过产生乙酸盐来预防肠致病性感染。
Nature. 2011 Jan 27;469(7331):543-7. doi: 10.1038/nature09646.
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Selection of bifidobacteria based on adhesion and anti-inflammatory capacity in vitro for amelioration of murine colitis.基于体外黏附和抗炎能力选择双歧杆菌改善小鼠结肠炎。
Appl Environ Microbiol. 2010 May;76(9):3048-51. doi: 10.1128/AEM.03127-09. Epub 2010 Mar 12.
8
Bifidobacterium infantis suppresses proinflammatory interleukin-17 production in murine splenocytes and dextran sodium sulfate-induced intestinal inflammation.婴儿双歧杆菌可抑制小鼠脾细胞中促炎性白细胞介素-17的产生以及葡聚糖硫酸钠诱导的肠道炎症。
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9
Does the intestinal bifidobacterial colonisation affect bacterial translocation?肠道双歧杆菌定植是否会影响细菌移位？
Anaerobe. 2008 Feb;14(1):43-8. doi: 10.1016/j.anaerobe.2007.09.003. Epub 2007 Oct 4.
10
Bifidobacterium breve enhances transforming growth factor beta1 signaling by regulating Smad7 expression in preterm infants.短双歧杆菌通过调节早产儿的Smad7表达增强转化生长因子β1信号传导。
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从健康人肠道分离出的菌株ICIS-202的基因组序列数据公布，该菌株可刺激巨噬细胞中活性氮氧化物的产生。

Genome sequence data announcement of strain ICIS-202 isolated from a healthy human intestine stimulating active nitrogen oxide production in macrophages.

作者信息

Bukharin Oleg V, Andryuschenko Sergey V, Perunova Natalia B, Ivanova Elena V, Chainikova Irina N, Zdvizhkova Irina A

机构信息

Orenburg Federal Research Center of the Ural Branch of the Russian Academy of Sciences, Institute for Cellular and Intracellular Symbiosis, Orenburg, Russia.

出版信息

Data Brief. 2019 Nov 6;27:104761. doi: 10.1016/j.dib.2019.104761. eCollection 2019 Dec.

DOI:10.1016/j.dib.2019.104761
PMID:31799343
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6883332/
Abstract

This report presents the data on the draft genome sequence of strain ICIS-202. The strain, isolated from the intestine of a young healthy woman, was deposited in the State Collection of Microorganisms of Normal Microbiota in Gabrichevsky Institute of Epidemiology and Microbiology, Moscow, Russian Federation as a prospective candidate for probiotic development. The size of the genome was 2,265,060 bp (62,4% G + C content). The annotation revealed 1771 coding sequences, including 1771 proteins, 5 rRNA, 52 tRNA, and 3 ncRNA genes. The draft genome sequence data of strain ICIS-202 is available in DBJ/EMBL/GenBank under the accession nos. SSMS00000000.1, PRJNA412271 and SAMN07709009 for Genome, Bioproject and Biosample databases, respectively.

摘要

本报告展示了菌株ICIS - 202的基因组序列草图数据。该菌株从一名年轻健康女性的肠道中分离得到，作为益生菌开发的潜在候选菌株保藏于俄罗斯联邦莫斯科加布里切夫斯基流行病学与微生物学研究所的正常微生物群国家微生物保藏中心。基因组大小为2,265,060 bp（G + C含量为62.4%）。注释显示有1771个编码序列，包括1771种蛋白质、5个rRNA、52个tRNA和3个非编码RNA基因。菌株ICIS - 202的基因组序列草图数据分别在DBJ/EMBL/GenBank的基因组数据库、生物项目数据库和生物样本数据库中，登录号分别为SSMS00000000.1、PRJNA412271和SAMN07709009。