Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran.
Stem Cell Research Center, Tabriz University of Medical Sciences, Tabriz, Iran; Biosensors and Bioelectronics Research Center, Ardabil University of Medical Sciences, Ardabil, Iran.
Biosens Bioelectron. 2020 Feb 15;150:111916. doi: 10.1016/j.bios.2019.111916. Epub 2019 Nov 24.
A specific and unique sequence probe was designed for detection of donkey adulteration in cooked sausages and its species specificity was confirmed bioinformatically in the common software and website (ClustalX and NCBI). Subsequently, a novel species-specific electrochemical DNA probe (locked nucleic acid, LNA) was synthesized and implemented in a construction of DNA-based electrochemical genosensor for sensitive, convenient and selective detection of donkey adulteration. The electrochemical behavior of the fabricated genosensor was studied by linear sweep, square wave, differential pulse voltammetry and electrochemical impedance spectroscopy techniques. Due to inherent optimal hybridization conditions, the lower limit of quantification (LLOQ) was obtained as 148 pM with a relative standard deviation of 0.16%. Eventually, as a proof of concept, the designed biosensor was successfully used for detection of donkey genetic element in consumable beef sausages preparations, as a real sample. It is predicted that the proposed biosensor will provide a sensitive, inexpensive, fast, and reliable bioassay for application in food analysis, forensic investigations, genetic screening and biodiagnostics. As a prominent feature of this study, the recorded results were confirmed by quantitative real time-polymerase chain reaction (QRT-PCR) as a standard method in adulteration analysis. Our future perspective is minutralization of the development bioassay for making on-desk device and specially merging the designed system by microfluidic systems for accelerating the analysis time.
设计了一种特定且独特的序列探针,用于检测熟香肠中的驴成分,并在常用软件和网站(ClustalX 和 NCBI)中通过生物信息学方法确认了其物种特异性。随后,合成了一种新型的物种特异性电化学 DNA 探针(锁核酸,LNA),并将其应用于基于 DNA 的电化学基因传感器的构建中,用于敏感、方便和选择性检测驴成分的掺假。通过线性扫描、方波、差分脉冲伏安法和电化学阻抗谱技术研究了所制备基因传感器的电化学行为。由于固有最佳杂交条件,定量下限(LLOQ)获得为 148 pM,相对标准偏差为 0.16%。最终,作为概念验证,该设计的生物传感器成功用于检测可食用牛肉香肠制品中的驴遗传成分,作为实际样品。预计该生物传感器将为应用于食品分析、法医调查、遗传筛选和生物诊断提供灵敏、廉价、快速和可靠的生物测定法。作为本研究的突出特点,记录的结果通过定量实时聚合酶链反应(QRT-PCR)得到了确认,QRT-PCR 是掺假分析的标准方法。我们未来的展望是使生物测定法中性化,以制作台式设备,并特别通过微流控系统合并设计的系统,以加速分析时间。