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德国地表水中存在耐多药且具有临床相关性的革兰氏阴性菌。

Multidrug-Resistant and Clinically Relevant Gram-Negative Bacteria Are Present in German Surface Waters.

作者信息

Falgenhauer Linda, Schwengers Oliver, Schmiedel Judith, Baars Christian, Lambrecht Oda, Heß Stefanie, Berendonk Thomas U, Falgenhauer Jane, Chakraborty Trinad, Imirzalioglu Can

机构信息

Institute of Medical Microbiology, Justus Liebig University Giessen, Giessen, Germany.

German Center for Infection Research (DZIF), Partner Site Giessen-Marburg-Langen, Justus Liebig University Giessen, Giessen, Germany.

出版信息

Front Microbiol. 2019 Nov 29;10:2779. doi: 10.3389/fmicb.2019.02779. eCollection 2019.

Abstract

Water is considered to play a role in the dissemination of antibiotic-resistant Gram-negative bacteria including those encoding Extended-spectrum beta-lactamases (ESBL) and carbapenemases. To investigate the role of water for their spread in more detail, we characterized ESBL/Carbapenemase-producing bacteria from surface water and sediment samples using phenotypic and genotypic approaches. ESBL/Carbapenemase-producing isolates were obtained from water/sediment samples. Species and antibiotic resistance were determined. A subset of these isolates ( = 33) was whole-genome-sequenced and analyzed for the presence of antibiotic resistance genes and virulence determinants. Their relatedness to isolates associated with human infections was investigated using multilocus sequence type and cgMLST-based analysis. Eighty-nine percent of the isolates comprised of clinically relevant species. Fifty-eight percent exhibited a multidrug-resistance phenotype. Two isolates harbored the mobile colistin resistance gene . One carbapenemase-producing isolate identified as harbored . Two isolates had sequence types (ST) associated with human infections (ST131 and ST1485) and a isolate was classified as hypervirulent. A multidrug-resistant (MDR) isolate encoding known virulence genes associated with severe lung infections in cystic fibrosis patients was also detected. The presence of MDR and clinically relevant isolates in recreational and surface water underlines the role of aquatic environments as both reservoirs and hot spots for MDR bacteria. Future assessment of water quality should include the examination of the multidrug resistance of clinically relevant bacterial species and thus provide an important link regarding the spread of MDR bacteria in a One Health context.

摘要

水被认为在包括携带超广谱β-内酰胺酶(ESBL)和碳青霉烯酶的革兰氏阴性耐药菌的传播中发挥作用。为更详细地研究水在其传播中的作用,我们采用表型和基因型方法对地表水和沉积物样本中产ESBL/碳青霉烯酶细菌进行了特征分析。从水/沉积物样本中获得了产ESBL/碳青霉烯酶的分离株。确定了其种类和抗生素耐药性。对这些分离株中的一个子集(n = 33)进行了全基因组测序,并分析了抗生素耐药基因和毒力决定因素的存在情况。使用多位点序列分型和基于cgMLST的分析研究了它们与人类感染相关分离株的亲缘关系。89%的分离株由临床相关菌种组成。58%表现出多重耐药表型。两个分离株携带可移动的黏菌素耐药基因。一个被鉴定为肺炎克雷伯菌的产碳青霉烯酶分离株携带bla NDM-1。两个分离株具有与人类感染相关的序列类型(ST)(ST131和ST1485),一个分离株被分类为高毒力株。还检测到一株编码与囊性纤维化患者严重肺部感染相关已知毒力基因的多重耐药(MDR)鲍曼不动杆菌分离株。娱乐用水和地表水中存在MDR和临床相关分离株,突出了水生环境作为MDR细菌储存库和热点的作用。未来的水质评估应包括对临床相关细菌物种多重耐药性的检测,从而在“同一健康”背景下为MDR细菌的传播提供重要联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/06a6/6896662/6a766fc9a135/fmicb-10-02779-g001.jpg

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