Laboratório de Evolução (LEVO), Instituto de Estudos Costeiros (IECOS), Universidade Federal do Pará, Campus de Bragança, 68 600-000 Pará, Brazil; CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus Agrário de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal.
Laboratório de Evolução (LEVO), Instituto de Estudos Costeiros (IECOS), Universidade Federal do Pará, Campus de Bragança, 68 600-000 Pará, Brazil; CIBIO-InBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus Agrário de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal.
Mol Phylogenet Evol. 2020 Apr;145:106723. doi: 10.1016/j.ympev.2019.106723. Epub 2019 Dec 28.
The high levels of Neotropical biodiversity are commonly associated with the intense Neogene-Quaternary geological events and climate dynamics. Here, we investigate the evolutionary history of two species of Neotropical closely related amphibians (R. horribilis and R. marina). We combine published data with new mitochondrial DNA sequences and multiple nuclear markers, including 12 microsatellites. The phylogenetic analyses showed support for grouping the samples in two main clades; R. horribilis (Central America and Mexico) and R. marina (South America east of the Andes). However, the phylogenetic inferences also show an evident mito-nuclear discordance. We use Approximate Bayesian Computation (ABC) to test the role of different events in the diversification between the two groups recovered. We found that both species were affected primarily by a recent Pleistocene divergence, which was similar to the divergence estimate revealed by the Isolation-with-Migration model, under persistent bidirectional gene flow through time. We provide the first evidence that R. horribilis is differentiated from the South American R. marina at the nuclear level supporting the taxonomic status of R. horribilis, which has been controversial for more than a century.
新热带地区生物多样性水平较高,通常与新近纪-第四纪地质事件和气候动态密切相关。在这里,我们研究了两种新热带密切相关的两栖动物(R. horribilis 和 R. marina)的进化历史。我们结合了已发表的数据和新的线粒体 DNA 序列以及多个核标记,包括 12 个微卫星。系统发育分析支持将样本分为两个主要分支;R. horribilis(中美洲和墨西哥)和 R. marina(安第斯山脉以东的南美洲)。然而,系统发育推断也显示出明显的线粒体-核不和谐。我们使用近似贝叶斯计算(ABC)来检验不同事件在两个群体之间多样化中的作用。我们发现,这两个物种主要受到最近更新世的分歧影响,这与隔离与迁移模型揭示的分歧估计相似,在持续的双向基因流中随着时间的推移。我们提供了第一个证据,表明 R. horribilis 在核水平上与南美洲的 R. marina 分化,支持了 R. horribilis 的分类地位,这一地位已经存在了一个多世纪的争议。