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肝细胞癌中miR-191-5p水平的升高及其潜在信号通路:一项通过微阵列和内部qRT-PCR对1291份临床样本进行验证的研究

Elevation of miR-191-5p level and its potential signaling pathways in hepatocellular carcinoma: a study validated by microarray and in-house qRT-PCR with 1,291 clinical samples.

作者信息

Wu Hua-Yu, Li Mei-Wei, Li Qi-Qi, Pang Yu-Yan, Chen Gang, Lu Hui-Ping, Pan Shang-Ling

机构信息

Department of Pathophysiology, School of Pre-clinical Medicine, Guangxi Medical University Nanning, Guangxi Zhuang Autonomous Region, P. R. China.

Department of Cell Biology and Genetics, School of Pre-clinical Medicine, Guangxi Medical University Nanning, Guangxi Zhuang Autonomous Region, P. R. China.

出版信息

Int J Clin Exp Pathol. 2019 Apr 1;12(4):1439-1456. eCollection 2019.

Abstract

BACKGROUND

The miR-191-5p expression has been reported to increase in hepatocellular carcinoma (HCC), but its clinical value and exact role remain to be further clarified. Thus, a comprehensive analysis was performed in the current study to explore the underlying function of miR-191-5p in HCC.

METHODS

HCC-related expression data were collected to conduct a thorough analysis to determine the miR-191-5p expression and its clinical significance in HCC, including microarray data from the Gene Expression Omnibus and ArrayExpress database as well as quantitative real-time polymerase chain reaction (qRT-PCR) data of 178 matched clinical samples. The underlying relationship between miR-191-5p and HCC was also explored on the basis of a series of bioinformatics analyses.

RESULTS

The overall pooled meta-analysis showed an overexpression of miR-191-5p in the HCC samples (SMD=0.400, 95% CI=0.139-0.663, P=0.003), consistent with the detected result of the clinical HCC samples through the qRT-PCR analysis. Higher miR-191-5p levels were correlated with advanced TNM stages (III and IV), higher pathological grades, and metastasis. Functionally, 64 potential target genes were acquired for further mechanism analysis. Two pathways (p75 neurotrophin receptor and liver kinase B1-mediated signaling pathways), which were likely modulated by miR-191-5p, were regarded to be linked to the deterioration of HCC. Early growth response 1 and UBE2D3 were identified as the most likely targets for miR-191-5p in HCC and were commonly implied in the top enriched pathways and protein-protein network.

CONCLUSIONS

In summary, miR-191-5p may function as a tumor promoter miRNA of HCC, and the miR-191-5p inhibitor may contribute to the targeted HCC treatment in the future.

摘要

背景

据报道,miR-191-5p在肝细胞癌(HCC)中表达增加,但其临床价值和确切作用仍有待进一步阐明。因此,本研究进行了全面分析,以探讨miR-191-5p在HCC中的潜在功能。

方法

收集与HCC相关的表达数据进行深入分析,以确定miR-191-5p在HCC中的表达及其临床意义,包括来自基因表达综合数据库和ArrayExpress数据库的微阵列数据以及178例匹配临床样本的定量实时聚合酶链反应(qRT-PCR)数据。还基于一系列生物信息学分析探索了miR-191-5p与HCC之间的潜在关系。

结果

总体汇总荟萃分析显示,HCC样本中miR-191-5p过表达(标准化均值差=0.400,95%置信区间=0.139-0.663,P=0.003),这与通过qRT-PCR分析临床HCC样本的检测结果一致。较高的miR-191-5p水平与晚期TNM分期(III期和IV期)、较高的病理分级和转移相关。在功能上,获得了64个潜在靶基因用于进一步的机制分析。两条可能受miR-191-5p调控的信号通路(p75神经营养因子受体和肝激酶B1介导的信号通路)被认为与HCC的恶化有关。早期生长反应1和UBE2D3被确定为HCC中miR-191-5p最可能的靶标,并且通常包含在最富集的信号通路和蛋白质-蛋白质网络中。

结论

总之,miR-191-5p可能作为HCC的肿瘤促进性微小RNA发挥作用,并且miR-191-5p抑制剂可能在未来有助于HCC的靶向治疗。

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