Bacchi Marine, Veinberg Elias, Field Martin J, Niklas Jens, Matsui Toshitaka, Tiede D M, Poluektov Oleg G, Ikeda-Saito Masao, Fontecave Marc, Artero Vincent
Laboratory of Chemistry and Biology of Metals, UMR 5249, Université Grenoble Alpes, CNRS, CEA, 17 rue des Martyrs, 38054, Grenoble Cedex 9, France.
DYNAMO/DYNAMOP, Institut de Biologie Structurale "Jean-Pierre Ebel", UMR 5075, Université Grenoble Alpes, CNRS, CEA, 41 rue Jules Horowitz, 38027, Grenoble Cedex 1, France.
Chempluschem. 2016 Oct;81(10):1083-1089. doi: 10.1002/cplu.201600218.
The insertion of cobaloxime catalysts in the heme-binding pocket of heme oxygenase (HO) yields artificial hydrogenases active for H evolution in neutral aqueous solutions. These novel biohybrids have been purified and characterized by using UV/visible and EPR spectroscopy. These analyses revealed the presence of two distinct binding conformations, thereby providing the cobaloxime with hydrophobic and hydrophilic environments, respectively. Quantum chemical/molecular mechanical docking calculations found open and closed conformations of the binding pocket owing to mobile amino acid residues. HO-based biohybrids incorporating a {Co(dmgH) } (dmgH =dimethylglyoxime) catalytic center displayed up to threefold increased turnover numbers with respect to the cobaloxime alone or to analogous sperm whale myoglobin adducts. This study thus provides a strong basis for further improvement of such biohybrids, using well-designed modifications of the second and outer coordination spheres, through site-directed mutagenesis of the host protein.
将钴胺肟催化剂插入血红素加氧酶(HO)的血红素结合口袋中,可产生在中性水溶液中对氢气释放具有活性的人工氢化酶。这些新型生物杂交体已通过紫外/可见光谱和电子顺磁共振光谱进行了纯化和表征。这些分析揭示了两种不同的结合构象的存在,从而分别为钴胺肟提供了疏水和亲水环境。量子化学/分子力学对接计算发现,由于可移动的氨基酸残基,结合口袋存在开放和封闭构象。包含{Co(dmgH) }(dmgH = 二甲基乙二肟)催化中心的基于HO的生物杂交体相对于单独的钴胺肟或类似的抹香鲸肌红蛋白加合物,周转数提高了多达三倍。因此,本研究为通过对宿主蛋白进行定点诱变,对第二和外配位层进行精心设计的修饰,进一步改进此类生物杂交体提供了坚实的基础。