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盐胁迫和激素处理下 s L. 表达归一化的参考基因的选择。

Selection of the Reference Gene for Expression Normalization in s L. under Abiotic Stress and Hormone Treatment.

机构信息

China Agriculture Research System (CARS-21) and Gansu Provincial Key Laboratory of The Special Medine Source Plant for Germplasm Innovation and Safety Utilization, No. 234 Xinzhen Road, Huangyang town, Liangzhou District, Wuwei, Gansu 733006, China.

Department of Resources Science of Traditional Chinese Medicines and State Key Laboratory of Natural Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, Jiangsu, China.

出版信息

Genes (Basel). 2020 Jan 23;11(2):124. doi: 10.3390/genes11020124.

Abstract

s L. is an important medical plant that produces analgesic drugs used for the pain caused by cancers and surgeries. Recent studies have focused on the expression genes involved in analgesic drugs biosynthesis, and the real-time quantitative polymerase chain reaction (RT-qPCR) technique is the main strategy. However, no reference genes have been reported for gene expression normalization in s. Herein, nine reference genes (actin (), glyceraldehyde-3-phosphate dehydrogenase (), cyclophilin 2 (), elongation factor 1-alpha (-), glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic (), nuclear cap-binding protein subunit 2 (), protein phosphatase 2A (), TIP41-like protein (), and tubulin beta chain ()) of were selected and analyzed under five different treatments (cold, drought, salt, heavy metal, and hormone stress). Then, BestKeeper, NormFinder, geNorm, and RefFinder were employed to analyze their gene expression stability. The results reveal that is the most stable reference gene under various experimental conditions. The work described here is the first report regarding on reference gene selection in which could be used for the accurate normalization of the gene expression involved in analgesic drug biosynthesis.

摘要

升麻是一种重要的药用植物,可产生用于治疗癌症和手术引起疼痛的镇痛药物。最近的研究集中在参与镇痛药物生物合成的表达基因上,实时定量聚合酶链反应(RT-qPCR)技术是主要策略。然而,在升麻中,尚未有用于基因表达归一化的参考基因被报道。在此,选择了 9 个参考基因(肌动蛋白()、甘油醛-3-磷酸脱氢酶()、环磷酸酶 2()、延伸因子 1-α()、甘油醛-3-磷酸脱氢酶 2、胞质()、核帽结合蛋白亚基 2()、蛋白磷酸酶 2A()、TIP41 样蛋白()和微管蛋白β链()),并在五种不同处理(冷、干旱、盐、重金属和激素胁迫)下进行分析。然后,使用 BestKeeper、NormFinder、geNorm 和 RefFinder 分析它们的基因表达稳定性。结果表明,在各种实验条件下,是最稳定的参考基因。这里描述的工作是首次在升麻中报告参考基因选择,可用于镇痛药物生物合成相关基因表达的准确归一化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b262/7074096/9515ad13e202/genes-11-00124-g001.jpg

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