Departments of Biochemistry and Pathology, University of Illinois, Urbana-Champaign, IL, USA; Cancer Center@ Illinois, University of Illinois, Urbana-Champaign, IL, USA.
Departments of Biochemistry and Pathology, University of Illinois, Urbana-Champaign, IL, USA; Cancer Center@ Illinois, University of Illinois, Urbana-Champaign, IL, USA; Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana-Champaign, IL, USA.
Semin Cell Dev Biol. 2020 Apr;100:74-87. doi: 10.1016/j.semcdb.2019.12.004. Epub 2020 Jan 22.
Recent advances in genetics and genomics have reinvigorated the field of liver regeneration. It is now possible to combine lineage-tracing with genome-wide studies to genetically mark individual liver cells and their progenies and detect precise changes in their genome, transcriptome, and proteome under normal versus regenerative settings. The recent use of single-cell RNA sequencing methodologies in model organisms has, in some ways, transformed our understanding of the cellular and molecular biology of liver regeneration. Here, we review the latest strides in our knowledge of general principles that coordinate regeneration of the liver and reflect on some conflicting evidence and controversies surrounding this topic. We consider the prominent mechanisms that stimulate homeostasis-related vis-à-vis injury-driven regenerative responses, highlight the likely cellular sources/depots that reconstitute the liver following various injuries and discuss the extrinsic and intrinsic signals that direct liver cells to proliferate, de-differentiate, or trans-differentiate while the tissue recovers from acute or chronic damage.
遗传学和基因组学的最新进展为肝脏再生领域注入了新的活力。现在可以将谱系追踪与全基因组研究相结合,对单个肝细胞及其后代进行基因标记,并在正常和再生环境下检测其基因组、转录组和蛋白质组的精确变化。最近在模式生物中使用单细胞 RNA 测序方法在某种程度上改变了我们对肝脏再生的细胞和分子生物学的理解。在这里,我们回顾了我们对协调肝脏再生的一般原则的最新认识,并反思了围绕这一主题的一些相互矛盾的证据和争议。我们考虑了刺激与损伤相关的稳态再生反应的主要机制,强调了在各种损伤后重建肝脏的可能的细胞来源/储存库,并讨论了指导肝细胞增殖、去分化或转分化的外在和内在信号,同时组织从急性或慢性损伤中恢复。