PIT Bioinformatics Group, Eötvös University, Budapest, Hungary.
Uratim Ltd., Budapest, Hungary.
PLoS One. 2020 Jan 28;15(1):e0227910. doi: 10.1371/journal.pone.0227910. eCollection 2020.
In the study of the human connectome, the vertices and the edges of the network of the human brain are analyzed: the vertices of the graphs are the anatomically identified gray matter areas of the subjects; this set is exactly the same for all the subjects. The edges of the graphs correspond to the axonal fibers, connecting these areas. In the biological applications of graph theory, it happens very rarely that scientists examine numerous large graphs on the very same, labeled vertex set. Exactly this is the case in the study of the connectomes. Because of the particularity of these sets of graphs, novel, robust methods need to be developed for their analysis. Here we introduce the new method of the Frequent Network Neighborhood Mapping for the connectome, which serves as a robust identification of the neighborhoods of given vertices of special interest in the graph. We apply the novel method for mapping the neighborhoods of the human hippocampus and discover strong statistical asymmetries between the connectomes of the sexes, computed from the Human Connectome Project. We analyze 413 braingraphs, each with 463 nodes. We show that the hippocampi of men have much more significantly frequent neighbor sets than women; therefore, in a sense, the connections of the hippocampi are more regularly distributed in men and more varied in women. Our results are in contrast to the volumetric studies of the human hippocampus, where it was shown that the relative volume of the hippocampus is the same in men and women.
在人类连接组学的研究中,分析了人脑网络的顶点和边:图的顶点是被解剖识别的主体的灰质区域;这个集合对于所有的被试者都是完全相同的。图的边对应于连接这些区域的轴突纤维。在图论的生物应用中,科学家们很少会检查同一标记顶点集上的许多大型图。在连接组学的研究中,正是这种情况。由于这些图集合的特殊性,需要开发新的、强大的方法来对其进行分析。在这里,我们引入了连接组学的频繁网络邻域映射的新方法,该方法可以稳健地识别图中特定感兴趣顶点的邻域。我们应用新方法来映射人类海马体的邻域,并发现了来自人类连接组计划的性别之间的连接组的强烈统计不对称性。我们分析了 413 个脑图,每个脑图都有 463 个节点。我们发现,男性的海马体具有更多的频繁邻居集合,因此,从某种意义上说,男性的海马体连接更加规则地分布,而女性的则更加多样化。我们的结果与人类海马体的体积研究相反,在体积研究中表明,男性和女性的海马体的相对体积是相同的。