Department of Biological Sciences and KI for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon, 34141, Republic of Korea.
Biomedical Omics Group, Korea Basic Science Institute, Cheongju, 28119, Republic of Korea.
ISME J. 2020 May;14(5):1111-1124. doi: 10.1038/s41396-020-0594-6. Epub 2020 Jan 28.
Microbial coculture to mimic the ecological habitat has been suggested as an approach to elucidate the effect of microbial interaction on secondary metabolite biosynthesis of Streptomyces. However, because of chemical complexity during coculture, underlying mechanisms are largely unknown. Here, we found that iron competition triggered antibiotic biosynthesis in Streptomyces coelicolor during coculture with Myxococcus xanthus. During coculture, M. xanthus enhanced the production of a siderophore, myxochelin, leading M. xanthus to dominate iron scavenging and S. coelicolor to experience iron-restricted conditions. This chemical competition, but not physical contact, activated the actinorhodin biosynthetic gene cluster and the branched-chain amino acid degradation pathway which imply the potential to produce precursors, along with activation of a novel actinorhodin export system. Furthermore, we found that iron restriction increased the expression of 21 secondary metabolite biosynthetic gene clusters (smBGCs) in other Streptomyces species. These findings suggested that the availability for key ions stimulates specific smBGCs, which had the potential to enhance secondary metabolite biosynthesis in Streptomyces.
微生物共培养以模拟生态栖息地已被提议作为一种阐明微生物相互作用对链霉菌次生代谢物生物合成影响的方法。然而,由于共培养过程中的化学复杂性,其潜在机制在很大程度上仍是未知的。在这里,我们发现铁竞争在与粘球菌共培养时触发了变铅青链霉菌中的抗生素生物合成。在共培养过程中,粘球菌增强了铁载体(myxochelin)的产生,使粘球菌主导铁的摄取,而变铅青链霉菌则经历铁限制条件。这种化学竞争,而不是物理接触,激活了放线紫红素生物合成基因簇和支链氨基酸降解途径,这意味着有可能产生前体,并激活一种新的放线紫红素输出系统。此外,我们发现铁限制增加了其他链霉菌物种中 21 个次生代谢物生物合成基因簇(smBGCs)的表达。这些发现表明关键离子的可用性刺激了特定的 smBGCs,这有可能增强链霉菌中的次生代谢物生物合成。