Centre of Food-omics, Department of Agro-Food Science and Technology, University of Bologna, Cesena 47521, Italy.
Key Laboratory of State Forestry and Grassland Administration on Conservation Biology of Rare Animals in the Giant Panda National Park, The China Conservation and Research Center for the Giant Panda, Dujiangyan, Sichuan 611800, China.
J Proteome Res. 2020 Mar 6;19(3):1052-1059. doi: 10.1021/acs.jproteome.9b00564. Epub 2020 Feb 7.
Differences in the concentration of metabolites in the biofluids of animals closely reflect their physiological diversities. In order to set the basis for a metabolomic atlas for giant panda (), we characterized the metabolome of healthy giant panda feces (23), urine (16), serum (6), and saliva (4) samples by means of H NMR. A total of 107 metabolites and a core metabolome of 12 metabolites was quantified across the four biological matrices. Through univariate analysis followed by robust principal component analysis, we were able to describe how the molecular profile observed in giant panda urine and feces was affected by gender and age. Among the molecules modified by age in feces, fucose plays a peculiar role because it is related to the digestion of bamboo's hemicellulose, which is considered as the main source of energy for giant panda. A metagenomic investigation directed toward this molecule showed that its concentration was indeed positively related to the two-component system pathway and negatively related to the amino sugar and nucleotide sugar metabolism pathway. Such work is meant to provide a robust framework for further -omics research studies on giant panda to accelerate our understanding of the interaction of giant panda with its natural environment.
动物生物体液中代谢物浓度的差异能很好地反映其生理多样性。为了给大熊猫建立代谢图谱,我们通过 NMR 技术对健康大熊猫粪便(23 个样本)、尿液(16 个样本)、血清(6 个样本)和唾液(4 个样本)的代谢组进行了分析。在这四个生物基质中总共定量了 107 种代谢物和 12 种核心代谢物。通过单变量分析和稳健主成分分析,我们可以描述大熊猫尿液和粪便中观察到的分子特征如何受到性别和年龄的影响。在粪便中受年龄影响的分子中,岩藻糖起着特殊的作用,因为它与竹子半纤维素的消化有关,竹子半纤维素被认为是大熊猫的主要能量来源。针对该分子的宏基因组学研究表明,其浓度与双组分系统途径呈正相关,与氨基糖和核苷酸糖代谢途径呈负相关。这项工作为进一步的大熊猫组学研究提供了一个稳健的框架,以加速我们对大熊猫与自然环境相互作用的理解。