Xie Yu, Gong Maoguo, Gao Yuan, Qin A K, Fan Xiaolong
Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education, School of Electronic Engineering, Xidian University, Xi'an, China.
Department of Computer Science and Software Engineering, Swinburne University of Technology, Melbourne, VIC, Australia.
Front Neurosci. 2020 Jan 9;13:1395. doi: 10.3389/fnins.2019.01395. eCollection 2019.
Composed of nodes and edges, graph structured data are organized in the non-Euclidean geometric space and ubiquitous especially in chemical compounds, proteins, etc. They usually contain rich structure information, and how to effectively extract inherent features of them is of great significance on the determination of function or traits in medicine and biology. Recently, there is a growing interest in learning graph-level representations for graph classification. Existing graph classification strategies based on graph neural networks broadly follow a single-task learning framework and manage to learn graph-level representations through aggregating node-level representations. However, they lack the efficient utilization of labels of nodes in a graph. In this paper, we propose a novel multi-task representation learning architecture coupled with the task of supervised node classification for enhanced graph classification. Specifically, the node classification task enforces node-level representations to take full advantage of node labels available in the graph and the graph classification task allows for learning graph-level representations in an end-to-end manner. Experimental results on multiple benchmark datasets demonstrate that the proposed architecture performs significantly better than various single-task graph neural network methods for graph classification.
图结构数据由节点和边组成,在非欧几里得几何空间中组织,并且无处不在,尤其是在化合物、蛋白质等中。它们通常包含丰富的结构信息,如何有效地提取其内在特征对于医学和生物学中功能或性状的确定具有重要意义。最近,人们对学习用于图分类的图级表示越来越感兴趣。现有的基于图神经网络的图分类策略大致遵循单任务学习框架,并通过聚合节点级表示来学习图级表示。然而,它们缺乏对图中节点标签的有效利用。在本文中,我们提出了一种新颖的多任务表示学习架构,结合监督节点分类任务以增强图分类。具体而言,节点分类任务促使节点级表示充分利用图中可用的节点标签,而图分类任务允许以端到端的方式学习图级表示。在多个基准数据集上的实验结果表明,所提出的架构在图分类方面的表现明显优于各种单任务图神经网络方法。