Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales (MNCN-CSIC), c/ José Gutiérrez Abascal 2, 28006, Madrid, Spain.
Department of Organismal Biology (Systematic Biology Program), Evolutionary Biology Centre, Uppsala University, Norbyv. 18C, 75236, Uppsala, Sweden.
BMC Evol Biol. 2020 Feb 5;20(1):22. doi: 10.1186/s12862-019-1573-2.
Polyplacophora, or chitons, have long fascinated malacologists for their distinct and rather conserved morphology and lifestyle compared to other mollusk classes. However, key aspects of their phylogeny and evolution remain unclear due to the few morphological, molecular, or combined phylogenetic analyses, particularly those addressing the relationships among the major chiton lineages.
Here, we present a mitogenomic phylogeny of chitons based on 13 newly sequenced mitochondrial genomes along with eight available ones and RNAseq-derived mitochondrial sequences from four additional species. Reconstructed phylogenies largely agreed with the latest advances in chiton systematics and integrative taxonomy but we identified some conflicts that call for taxonomic revisions. Despite an overall conserved gene order in chiton mitogenomes, we described three new rearrangements that might have taxonomic utility and reconstructed the most likely scenario of gene order change in this group. Our phylogeny was time-calibrated using various fossils and relaxed molecular clocks, and the robustness of these analyses was assessed with several sensitivity analyses. The inferred ages largely agreed with previous molecular clock estimates and the fossil record, but we also noted that the ambiguities inherent to the chiton fossil record might confound molecular clock analyses.
In light of the reconstructed time-calibrated framework, we discuss the evolution of key morphological features and call for a continued effort towards clarifying the phylogeny and evolution of chitons.
多板纲,也称为石鳖,其独特而相对保守的形态和生活方式与其他软体动物门相比,长期以来一直吸引着贝类学家的兴趣。然而,由于形态学、分子学或综合系统发育分析的数量较少,特别是那些涉及主要石鳖谱系之间关系的分析,它们的系统发育和进化的关键方面仍然不清楚。
在这里,我们基于 13 个新测序的线粒体基因组以及 8 个已有的线粒体基因组和另外 4 个物种的 RNAseq 衍生的线粒体序列,展示了石鳖的线粒体基因组系统发育。重建的系统发育与石鳖系统学和综合分类学的最新进展基本一致,但我们发现了一些需要进行分类修订的冲突。尽管石鳖线粒体基因组中整体上存在保守的基因排列,但我们描述了三个可能具有分类学用途的新重排,并重建了该组中基因排列变化的最可能情景。我们的系统发育使用各种化石和松弛分子钟进行了时间校准,并通过几种敏感性分析评估了这些分析的稳健性。推断的年龄与以前的分子钟估计和化石记录基本一致,但我们也注意到,石鳖化石记录中固有的模糊性可能会混淆分子钟分析。
根据重建的时间校准框架,我们讨论了关键形态特征的进化,并呼吁继续努力阐明石鳖的系统发育和进化。