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盐城保护区野生越冬丹顶鹤基于微卫星标记和线粒体基因序列的遗传多样性

Genetic diversity of wild wintering red-crowned crane () by microsatellite markers and mitochondrial gene sequence in the Yancheng reserve.

作者信息

Sun Cheng-He, Liu Hong-Yi, Xu Peng, Lu Chang-Hu

机构信息

College of Biology and the Environment, Nanjing Forestry University, Nanjing, China.

出版信息

Anim Biotechnol. 2021 Oct;32(5):531-536. doi: 10.1080/10495398.2020.1725538. Epub 2020 Feb 8.

Abstract

The red-crowned crane () is one of the most endangered cranes in the world, and its wild population is still declining. To characterize the genetic resources of East Asian migratory populations, we studied the genetic variation in wild red-crowned cranes at the Yancheng reserve. Based on a partial gene sequence, 32 wild red-crowned crane samples were screened from 100 feathers with unknown sample information. Twelve haplotypes were detected using 32 wild red-crowned crane samples. Six pairs of published microsatellite primers were selected for genotyping. A total of 47 alleles were obtained, with an average of 7.8 alleles per locus. All microsatellite loci were highly polymorphic; the average polymorphic information content and expected heterozygosity were 0.721 ± 0.080 and 0.768 ± 0.071, respectively. These results show that the East Asian migratory population of wild red-crowned cranes exhibits high polymorphism. These data are useful for informing reintroduction efforts. The study results provide a basis for understanding the population genetic properties of an endangered crane.

摘要

丹顶鹤是世界上最濒危的鹤类之一,其野生种群数量仍在下降。为了表征东亚迁徙种群的遗传资源,我们研究了盐城保护区野生丹顶鹤的遗传变异。基于部分基因序列,从100份样本信息未知的羽毛中筛选出32份野生丹顶鹤样本。使用这32份野生丹顶鹤样本检测到12种单倍型。选择6对已发表的微卫星引物进行基因分型。共获得47个等位基因,每个位点平均有7.8个等位基因。所有微卫星位点均具有高度多态性;平均多态信息含量和期望杂合度分别为0.721±0.080和0.768±0.071。这些结果表明,东亚野生丹顶鹤迁徙种群表现出高度多态性。这些数据有助于指导重新引入工作。研究结果为了解濒危鹤类的种群遗传特性提供了依据。

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