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单细胞分析揭示粪肠球菌性信息素反应导致所有诱导细胞中全长共轭操纵子转录本的表达。

Single-Cell Analysis Reveals that the Enterococcal Sex Pheromone Response Results in Expression of Full-Length Conjugation Operon Transcripts in All Induced Cells.

机构信息

Department of Microbiology and Immunology, University of Minnesota, Minneapolis, Minnesota, USA.

Department of Chemical Engineering and Materials Science, University of Minnesota, Minneapolis, Minnesota, USA.

出版信息

J Bacteriol. 2020 Mar 26;202(8). doi: 10.1128/JB.00685-19.

Abstract

For high-frequency transfer of pCF10 between cells, induced expression of the pCF10 genes encoding conjugative machinery from the operon is required. This process is initiated by the cCF10 (C) inducer peptide produced by potential recipient cells. The expression timing of an "early" gene just downstream of the inducible promoter, has been studied extensively in single cells. However, several previous studies suggest that only 1 to 10% of donors induced for early gene expression actually transfer plasmids to recipients, even at a very high recipient population density. One possible explanation for this is that only a minority of pheromone-induced donors actually transcribe the entire operon. Such cells would not be able to functionally conjugate but might play another role in the group behavior of donors. Here, we sought to (i) simultaneously assess the presence of RNAs produced from the proximal (early induced transcripts [early Q]) and distal (late Q) portions of the operon in individual cells, (ii) investigate the prevalence of heterogeneity in induced transcript length, and (iii) evaluate the temporality of induced transcript expression. Using fluorescent hybridization chain reaction (HCR) transcript labeling and single-cell microscopic analysis, we observed that most cells expressing early transcripts (Q, , and ) also expressed late transcripts (, , and ). These data support the conclusion that, after induction is initiated, transcription likely extends through the end of the conjugation machinery operon for most, if not all, induced cells. In , conjugative plasmids like pCF10 often carry antibiotic resistance genes. With antibiotic treatment, bacteria benefit from plasmid carriage; however, without antibiotic treatment, plasmid gene expression may have a fitness cost. Transfer of pCF10 is mediated by cell-to-cell signaling, which activates the expression of conjugation genes and leads to efficient plasmid transfer. Yet, not all donor cells in induced populations transfer the plasmid. We examined whether induced cells might not be able to functionally conjugate due to premature induced transcript termination. Single-cell analysis showed that most induced cells do, in fact, express all of the genes required for conjugation, suggesting that premature transcription termination within the operon does not account for failure of induced donor cell gene transfer.

摘要

为了实现 pCF10 在细胞间的高频转移,需要诱导操纵子中编码接合机制的 pCF10 基因表达。这一过程由潜在受体细胞产生的 cCF10(C)诱导肽引发。在单个细胞中,诱导启动子下游的“早期”基因的表达时间已被广泛研究。然而,之前的几项研究表明,即使在受体细胞密度非常高的情况下,只有 1%到 10%诱导早期基因表达的供体实际上会将质粒转移给受体。一种可能的解释是,只有少数的诱导供体实际上转录了整个 操纵子。这些细胞不能进行功能接合,但可能在供体的群体行为中发挥另一种作用。在这里,我们试图:(i)同时评估单个细胞中来自 操纵子近端(早期诱导转录物[早期 Q])和远端(晚期 Q)部分的 RNA 的存在情况;(ii)研究诱导转录物长度异质性的普遍性;(iii)评估诱导转录物表达的时间性。使用荧光杂交链反应(HCR)转录物标记和单细胞显微镜分析,我们观察到表达早期转录物(Q、、和)的大多数细胞也表达晚期转录物(、、和)。这些数据支持这样的结论,即在诱导开始后,转录很可能延伸穿过大多数(如果不是全部)诱导细胞的接合机制操纵子的末端。在 中,像 pCF10 这样的接合质粒通常携带抗生素抗性基因。用抗生素处理,细菌受益于质粒携带;然而,没有抗生素处理,质粒基因表达可能有一个适应度成本。pCF10 的转移是由细胞间信号介导的,它激活了接合基因的表达,导致质粒的高效转移。然而,诱导群体中的并非所有供体细胞都能转移质粒。我们研究了诱导细胞是否由于过早的诱导转录终止而不能进行功能接合。单细胞分析表明,大多数诱导细胞实际上表达了所有进行接合所需的基因,这表明 操纵子内的过早转录终止并不能解释诱导供体细胞基因转移失败的原因。

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