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普通小麦3D染色体缺失系的构建

Development of Deletion Lines for Chromosome 3D of Bread Wheat.

作者信息

Svačina Radim, Karafiátová Miroslava, Malurová Magdaléna, Serra Heïdi, Vítek Dominik, Endo Takashi R, Sourdille Pierre, Bartoš Jan

机构信息

Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, Olomouc, Czechia.

INRA, Génétique, Diversité, Ecophysiologie des Céréales, Clermont-Ferrand, France.

出版信息

Front Plant Sci. 2020 Jan 28;10:1756. doi: 10.3389/fpls.2019.01756. eCollection 2019.

Abstract

The identification of genes of agronomic interest in bread wheat ( L.) is hampered by its allopolyploid nature (2n = 6x = 42; AABBDD) and its very large genome, which is largely covered by transposable elements. However, owing to this complex structure, aneuploid stocks can be developed in which fragments or entire chromosomes are missing, sometimes resulting in visible phenotypes that help in the cloning of affected genes. In this study, the 2C gametocidal chromosome from was used to develop a set of 113 deletion lines for chromosome 3D in the reference cultivar Chinese Spring. Eighty-four markers were used to show that the deletions evenly covered chromosome 3D and ranged from 6.5 to 357 Mb. Cytogenetic analyses confirmed that the physical size of the deletions correlated well with the known molecular size deduced from the reference sequence. This new genetic stock will be useful for positional cloning of genes on chromosome 3D, especially for affecting homoeologous pairing in bread wheat.

摘要

普通小麦(Triticum aestivum L.)中具有农艺学意义基因的鉴定受到其异源六倍体性质(2n = 6x = 42;AABBDD)及其非常大的基因组的阻碍,该基因组大部分被转座元件覆盖。然而,由于这种复杂的结构,可以培育非整倍体植株,其中片段或整条染色体缺失,有时会产生可见的表型,有助于克隆受影响的基因。在本研究中,来自中间偃麦草(Thinopyrum intermedium)的2C杀配子染色体被用于培育中国春参考品种中113个3D染色体缺失系。使用84个标记来表明这些缺失均匀覆盖3D染色体,范围从6.5到357 Mb。细胞遗传学分析证实,缺失的物理大小与从参考序列推导的已知分子大小密切相关。这种新的遗传材料将有助于3D染色体上基因的定位克隆,特别是对于影响普通小麦同源配对的基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b559/6997527/295194fd6fa8/fpls-10-01756-g001.jpg

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