Faculty of Biology and Biotechnology, Photobiotechnology, Ruhr University Bochum, Universitätsstr. 150, 44801, Bochum, Germany.
Charles River Laboratories, Cologne, Germany.
J Biol Inorg Chem. 2020 Mar;25(2):267-283. doi: 10.1007/s00775-020-01759-2. Epub 2020 Feb 11.
Hemoglobins (Hbs) utilize heme b as a cofactor and are found in all kingdoms of life. The current knowledge reveals an enormous variability of Hb primary sequences, resulting in topological, biochemical and physiological individuality. As Hbs appear to modulate their reactivities through specific combinations of structural features, predicting the characteristics of a given Hb is still hardly possible. The unicellular green alga Chlamydomonas reinhardtii contains 12 genes encoding diverse Hbs of the truncated lineage, several of which possess extended N- or C-termini of unknown function. Studies on some of the Chlamydomonas Hbs revealed yet unpredictable structural and biochemical variations, which, along with a different expression of their genes, suggest diverse physiological roles. Chlamydomonas thus represents a promising system to analyze the diversification of Hb structure, biochemistry and physiology. Here, we report the crystal structure, resolved to 1.75 Å, of the heme-binding domain of cyanomet THB11 (Cre16.g662750), one of the pentacoordinate algal Hbs, which offer a free Fe-coordination site in the reduced state. The overall fold of THB11 is conserved, but individual features such as a kink in helix E, a tilted heme plane and a clustering of methionine residues at a putative tunnel exit appear to be unique. Both N- and C-termini promote the formation of oligomer mixtures, and the absence of the C terminus results in reduced nitrite reduction rates. This work widens the structural and biochemical knowledge on the 2/2Hb family and suggests that the N- and C-terminal extensions of the Chlamydomonas 2/2Hbs modulate their reactivity by intermolecular interactions.
血红蛋白(Hbs)利用血红素 b 作为辅因子,存在于所有生命领域。目前的知识揭示了 Hb 一级序列的巨大可变性,导致拓扑、生化和生理的个体差异。由于 Hbs 似乎通过特定的结构特征组合来调节其反应性,因此预测给定 Hb 的特性仍然几乎不可能。单细胞绿藻莱茵衣藻含有 12 个基因,编码截短谱系的多种 Hbs,其中一些具有未知功能的扩展 N-或 C-末端。对一些衣藻 Hbs 的研究揭示了出人意料的结构和生化变化,这些变化以及它们基因的不同表达,表明了不同的生理作用。因此,衣藻代表了一个分析 Hb 结构、生化和生理多样化的有前途的系统。在这里,我们报告了一种五配位藻类 Hbs 之一的氰钴胺素 THB11(Cre16.g662750)的血红素结合域的晶体结构,分辨率为 1.75Å,该结构处于还原状态时提供了一个游离的 Fe 配位位点。THB11 的整体折叠是保守的,但个别特征,如螺旋 E 中的扭曲、倾斜的血红素平面和假定隧道出口处的蛋氨酸残基聚集,似乎是独特的。N-和 C-末端都促进了寡聚混合物的形成,而 C-末端的缺失导致亚硝酸盐还原速率降低。这项工作拓宽了对 2/2Hb 家族的结构和生化知识的认识,并表明衣藻 2/2Hbs 的 N-和 C-末端延伸通过分子间相互作用调节其反应性。