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一般两样本孟德尔随机化分析的功效计算。

Power calculation for the general two-sample Mendelian randomization analysis.

机构信息

Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, Maryland.

出版信息

Genet Epidemiol. 2020 Apr;44(3):290-299. doi: 10.1002/gepi.22284. Epub 2020 Feb 11.

Abstract

Mendelian randomization (MR) study has become a powerful approach to assess the potential causal effect of a risk exposure on an outcome. Most current MR studies are conducted under the two-sample setting by combining summary data from two separate genome-wide association studies (GWAS), with one providing measures on associations between genetic markers and the risk exposure, and the other on associations between genetic markers and the outcome. We develop a power calculation procedure for the general two-sample MR study, allowing for the use of multiple genetic markers, and shared participants between the two GWAS. This procedure requires a few easy-to-interpret parameters and is validated through extensive simulation studies.

摘要

孟德尔随机化(MR)研究已成为评估风险暴露对结果潜在因果效应的有力方法。目前大多数 MR 研究都是在两样本设置下进行的,通过合并两个独立的全基因组关联研究(GWAS)的汇总数据,其中一个提供了遗传标记与风险暴露之间的关联度量,另一个提供了遗传标记与结果之间的关联度量。我们为一般的两样本 MR 研究开发了一种功效计算程序,允许使用多个遗传标记,并允许在两个 GWAS 之间共享参与者。该程序需要几个易于理解的参数,并通过广泛的模拟研究进行验证。

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