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固定化染料脱色过氧化物酶(DyP)及其用于过氧化氢生物传感的定向进化变体。

Immobilized dye-decolorizing peroxidase (DyP) and directed evolution variants for hydrogen peroxide biosensing.

机构信息

Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Av. da República, 2780-157, Oeiras, Portugal.

Technische Universität Berlin, Inbstitut für Chemie, Sekr. PC14, Straße des 17. Juni 135, D-10623, Berlin, Germany.

出版信息

Biosens Bioelectron. 2020 Apr 1;153:112055. doi: 10.1016/j.bios.2020.112055. Epub 2020 Jan 27.

DOI:10.1016/j.bios.2020.112055
PMID:32056659
Abstract

Immobilized dye-decolorizing peroxidase from Pseudomonas putida MET94 (PpDyP) and three variants generated by directed evolution (DE) are studied aiming at the design of a biosensor for HO detection. Structural properties of the enzymes in solution and immobilized state are addressed by resonance Raman (RR) and surface enhanced RR (SERR) spectroscopy, and the electrocatalytic properties are analyzed by electrochemistry. The wild-type (wt) and 29E4 variant (with E188K and H125Y mutations) represent excellent candidates for development of HO biosensors, since they exhibit a good dynamic response range (1-200 μM HO), short response times (2 s) and a superior sensitivity (1.3-1.4 A⋅M⋅cm) for HO, as well as selectivity and long term stability. In contrast to the solution state, 6E10 (with E188K, A142V and H125Y mutations) and 25F6 (with E188K, A142V, H125Y and G129D mutations) variants display much lower activity and are inhibited by high concentrations of HO upon adsorption on an electrode. In terms of sensitivity, the bioelectrodes employing wt PpDyP and 29E4 variant outperform HRP based counterparts reported in the literature by 1-4 orders of magnitude. We propose the development of wt or 29E4 PpDyP based biosensor as a valuable alternative to devices that rely on peroxidases.

摘要

固定化染料脱色过氧化物酶来自恶臭假单胞菌 MET94(PpDyP)和通过定向进化(DE)产生的三个变体,旨在设计用于 HO 检测的生物传感器。通过共振拉曼(RR)和表面增强 RR(SERR)光谱研究了溶液和固定状态下的酶的结构特性,并通过电化学分析了电催化特性。野生型(wt)和 29E4 变体(具有 E188K 和 H125Y 突变)是开发 HO 生物传感器的极好候选物,因为它们表现出良好的动态响应范围(1-200 μM HO),较短的响应时间(2 s)和对 HO 的更高灵敏度(1.3-1.4 A⋅M⋅cm),以及选择性和长期稳定性。与溶液状态相比,6E10(具有 E188K、A142V 和 H125Y 突变)和 25F6(具有 E188K、A142V、H125Y 和 G129D 突变)变体在吸附到电极上时,活性较低,并且会被高浓度的 HO 抑制。就灵敏度而言,基于 wt PpDyP 和 29E4 变体的生物电极比文献中报道的基于 HRP 的对应物高出 1-4 个数量级。我们提出开发基于 wt 或 29E4 PpDyP 的生物传感器,作为依赖过氧化物酶的设备的有价值替代品。

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