Department of Chemical Engineering, Biosystems Engineering Laboratory, Bogazici University, 34342, Istanbul, Turkey.
Department of Electrical and Electronics Engineering, BUMEMS Laboratory, Bogazici University, 34342, Istanbul, Turkey.
Biomed Microdevices. 2020 Feb 20;22(1):20. doi: 10.1007/s10544-020-0474-x.
Cyclo Olefin Polymer (COP) based microbioreactors on a microfluidic chip were produced in house by hot-embossing and thermo-compression bonding methods. The chip allows two different experiments to be performed on trapped cells at the same time. On one side of the chip, red fluorescent protein (RFP) tagged nucleolar Nop56 protein was used to track changes in cell cycle as well as protein synthesis within the yeast cells under the application of the anti-tumor agent hydroxyurea (HU). Simultaneously, on the other side of the chip, the response of yeast cells to the drug metformin, mTOR inhibitor, was investigated to reveal the role of TOR signaling in ribosome biogenesis and cell proliferation. The results of 20 h long experiments are captured by taking brightfield and fluorescent microscopy images of the trapped cells every 9 min. The expression of Nop56 protein of ribosome assembly and synthesis was densely observed during G1 phase of cell cycle, and later towards the end of cell cycle the ribosomal protein expression slowed down. Under HU treatment, the morphology of yeast cells changed, but after cessation of HU, the biomass synthesis rate was sustained as monitored by the cell perimeter. Under metformin treatment, the perimeters of single cells were observed to decrease, implying a decrease in biomass growth; however these cells continued their proliferation during and after the drug application. The relation between ribosome biogenesis and cell cycle was successfully investigated on single cell basis, capturing cell-to-cell variations, which cannot be tracked by regular macroscale bioreactors.
采用热压模塑和热压键合方法,在内部制备了基于环烯烃聚合物 (COP) 的微生物反应器微流控芯片。该芯片允许同时在被困细胞上进行两种不同的实验。在芯片的一侧,使用红色荧光蛋白 (RFP) 标记的核仁 Nop56 蛋白来跟踪肿瘤抑制剂羟基脲 (HU) 作用下酵母细胞周期变化和蛋白质合成。同时,在芯片的另一侧,研究了酵母细胞对二甲双胍、mTOR 抑制剂的反应,以揭示 TOR 信号在核糖体生物发生和细胞增殖中的作用。通过每隔 9 分钟对被困细胞进行明场和荧光显微镜成像,捕获 20 小时长实验的结果。在细胞周期的 G1 期,观察到核糖体组装和合成的 Nop56 蛋白表达密集,随后在细胞周期结束时,核糖体蛋白表达减缓。在 HU 处理下,酵母细胞的形态发生变化,但在 HU 停止后,通过细胞周长监测到生物量合成速率得以维持。在二甲双胍处理下,观察到单细胞的周长减小,这意味着生物量生长减少;然而,这些细胞在药物应用期间和之后继续增殖。成功地在单细胞基础上研究了核糖体生物发生和细胞周期之间的关系,捕捉到了常规宏观生物反应器无法跟踪的细胞间变化。