Laboratory for Wine Microbiology, Department International Business, Heilbronn University, Max-Planck-Str. 39, 74081, Heilbronn, Germany.
Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands.
Antonie Van Leeuwenhoek. 2020 Jun;113(6):773-778. doi: 10.1007/s10482-020-01387-5. Epub 2020 Feb 21.
Three strains originating from insect frass in South Africa, yellow foxglove in Hungary and soil in France, were characterised phenotypically and by sequencing of the D1/D2 domain of the large subunit and the ITS1-5.8S-ITS2 (ITS)-region of the rRNA gene. The strains have identical D1/D2 domain sequences and only one strain shows a 1 bp indel in a 9 bp homopolymer A/T repeat within the ITS-region. Based on sequence analysis Hyphopichia burtonii is the closest related species. The investigated strains differ from the type strain of H. burtonii by 1.9% (9 substitutions and an indel) in the D1/D2 domain and by 23 substitutions and 21-22 indels in the ITS-region. Since the sequence variability is very low among the three strains and the sequence divergence with the closely related H. burtonii exceeds the level generally encountered between species we propose the new species Hyphopichia lachancei f.a., sp. nov. to accommodate the three novel strains. From H. burtonii the new species can be distinguished phenotypically by its inability to ferment cellobiose and by the formation of endospores (Holotype: CBS 5999; Isotype: NCAIM Y.02228; MycoBank no.: MB833616).
三种菌株来源于南非昆虫粪便、匈牙利黄花紫苑和法国土壤,通过大亚基 D1/D2 结构域和 rRNA 基因 ITS1-5.8S-ITS2(ITS)区的测序进行了表型和序列特征分析。这些菌株具有相同的 D1/D2 结构域序列,只有一株在 ITS 区的 9bp 同聚物 A/T 重复内有 1bp 的插入缺失。根据序列分析,最接近的相关物种是类酵母丝孢酵母。所研究的菌株与 H. burtonii 的模式菌株在 D1/D2 结构域中相差 1.9%(9 个取代和一个插入缺失),在 ITS 区中相差 23 个取代和 21-22 个插入缺失。由于这三个菌株之间的序列变异性非常低,与密切相关的 H. burtonii 的序列差异超过了通常在物种之间遇到的水平,因此我们建议用新的物种 Hyphopichia lachancei f.a., sp. nov.来容纳这三个新菌株。与 H. burtonii 相比,新物种在表型上可以通过不能发酵纤维二糖和形成内生孢子来区分(模式株:CBS 5999;等模式株:NCAIM Y.02228;MycoBank 编号:MB833616)。