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应用热力学计算的高效生物催化二卤代嘌呤核苷类似物合成。

Efficient Biocatalytic Synthesis of Dihalogenated Purine Nucleoside Analogues Applying Thermodynamic Calculations.

机构信息

Chair of Bioprocess Engineering, Faculty III Process Sciences, Institute of Biotechnology, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany.

Chemistry of Natural and Microbial Products Department, Pharmaceutical and Drug Industries Research Division, National Research Centre, Dokki, 12622 Cairo, Egypt.

出版信息

Molecules. 2020 Feb 19;25(4):934. doi: 10.3390/molecules25040934.

Abstract

The enzymatic synthesis of nucleoside analogues has been shown to be a sustainable and efficient alternative to chemical synthesis routes. In this study, dihalogenated nucleoside analogues were produced by thermostable nucleoside phosphorylases in transglycosylation reactions using uridine or thymidine as sugar donors. Prior to the enzymatic process, ideal maximum product yields were calculated after the determination of equilibrium constants through monitoring the equilibrium conversion in analytical-scale reactions. Equilibrium constants for dihalogenated nucleosides were comparable to known purine nucleosides, ranging between 0.071 and 0.081. To achieve 90% product yield in the enzymatic process, an approximately five-fold excess of sugar donor was needed. Nucleoside analogues were purified by semi-preparative HPLC, and yields of purified product were approximately 50% for all target compounds. To evaluate the impact of halogen atoms in positions 2 and 6 on the antiproliferative activity in leukemic cell lines, the cytotoxic potential of dihalogenated nucleoside analogues was studied in the leukemic cell line HL-60. Interestingly, the inhibition of HL-60 cells with dihalogenated nucleoside analogues was substantially lower than with monohalogenated cladribine, which is known to show high antiproliferative activity. Taken together, we demonstrate that thermodynamic calculations and small-scale experiments can be used to produce nucleoside analogues with high yields and purity on larger scales. The procedure can be used for the generation of new libraries of nucleoside analogues for screening experiments or to replace the chemical synthesis routes of marketed nucleoside drugs by enzymatic processes.

摘要

酶促合成核苷类似物已被证明是替代化学合成路线的可持续和有效的方法。在这项研究中,二卤代核苷类似物通过热稳定的核苷磷酸化酶在转糖苷反应中使用尿苷或胸苷作为糖供体生成。在酶促过程之前,通过监测分析规模反应中的平衡转化率来确定平衡常数后,计算出理想的最大产物产率。二卤代核苷的平衡常数与已知的嘌呤核苷相当,范围在 0.071 到 0.081 之间。为了在酶促过程中达到 90%的产物产率,需要大约五倍过量的糖供体。核苷类似物通过半制备 HPLC 进行纯化,所有目标化合物的纯化产物产率约为 50%。为了评估 2 位和 6 位卤素原子对白血病细胞系中抗增殖活性的影响,研究了二卤代核苷类似物在白血病细胞系 HL-60 中的细胞毒性潜力。有趣的是,与已知具有高抗增殖活性的单卤代克拉屈滨相比,二卤代核苷类似物对 HL-60 细胞的抑制作用明显较低。总之,我们证明热力学计算和小规模实验可用于在较大规模上以高产率和高纯度生产核苷类似物。该方法可用于生成新的核苷类似物文库进行筛选实验,或通过酶促过程替代市售核苷药物的化学合成路线。

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