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2019年美国国家标准与技术研究院-美国食品药品监督管理局生物制品和生物制造中病毒外来因子下一代测序检测标准研讨会报告

Report of the 2019 NIST-FDA workshop on standards for next generation sequencing detection of viral adventitious agents in biologics and biomanufacturing.

作者信息

Cleveland Megan H, Anekella Bharathi, Brewer Michael, Chin Pei-Ju, Couch Heather, Delwart Eric, Huggett Jim, Jackson Scott, Martin Javier, Monpoeho Serge, Morrison Tom, Ng Siemon H S, Ussery David, Khan Arifa S

机构信息

National Institute of Standards and Technology, 100 Bureau Dr, Gaithersburg, MD, 20899, USA.

LGC-Clinical Diagnostic Business Unit, 910 Clopper Road, Gaithersburg, MD, 20878, USA.

出版信息

Biologicals. 2020 Mar;64:76-82. doi: 10.1016/j.biologicals.2020.02.003. Epub 2020 Feb 22.

Abstract

Adventitious virus testing assures product safety by demonstrating the absence of viruses that could be unintentionally introduced during the manufacturing process. The capabilities of next-generation sequencing (NGS) for broad virus detection in biologics have been demonstrated by the detection of known and novel viruses that were previously missed using the recommended routine assays for adventitious agent testing. A meeting was co-organized by the National Institute of Standards and Technology and the U.S. Food and Drug Administration on September 18-19, 2019 in Gaithersburg, Maryland, USA, to facilitate standardization of NGS technologies for applications of adventitious virus testing in biologics. The goal was to assess the currently used standards for virus detection by NGS and their public availability, and to identify additional needs for different types of reference materials and standards (natural and synthetic). The meeting focused on the NGS processes from sample preparation through sequencing but did not thoroughly cover bioinformatics, since this was considered to be the topic of a separate meeting.

摘要

外源病毒检测通过证明在生产过程中未无意引入病毒来确保产品安全。下一代测序(NGS)用于生物制品中广泛病毒检测的能力已通过检测先前使用推荐的外源因子检测常规方法遗漏的已知和新型病毒得到证明。美国国家标准与技术研究院和美国食品药品监督管理局于2019年9月18日至19日在美国马里兰州盖瑟斯堡联合组织了一次会议,以促进NGS技术在生物制品外源病毒检测应用方面的标准化。目的是评估目前用于通过NGS进行病毒检测的标准及其公开可用性,并确定对不同类型参考材料和标准(天然和合成)的其他需求。会议重点关注从样品制备到测序的NGS流程,但未全面涵盖生物信息学,因为这被认为是另一次会议的主题。

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本文引用的文献

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Rapid Sequencing of Multiple RNA Viruses in Their Native Form.多种天然形式RNA病毒的快速测序
Front Microbiol. 2019 Feb 25;10:260. doi: 10.3389/fmicb.2019.00260. eCollection 2019.
9
Ebolavirus comparative genomics.埃博拉病毒比较基因组学
FEMS Microbiol Rev. 2015 Sep;39(5):764-78. doi: 10.1093/femsre/fuv031. Epub 2015 Jul 14.

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