Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø, Denmark.
Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads 221, 2800, Kongens Lyngby, Denmark.
Nat Commun. 2020 Feb 24;11(1):1026. doi: 10.1038/s41467-020-14833-9.
Structural and functional studies were conducted of the glucuronoyl esterase (GE) from Cerrena unicolor (CuGE), an enzyme catalyzing cleavage of lignin-carbohydrate ester bonds. CuGE is an α/β-hydrolase belonging to carbohydrate esterase family 15 (CE15). The enzyme is modular, comprised of a catalytic and a carbohydrate-binding domain. SAXS data show CuGE as an elongated rigid molecule where the two domains are connected by a rigid linker. Detailed structural information of the catalytic domain in its apo- and inactivated form and complexes with aldouronic acids reveal well-defined binding of the 4-O-methyl-a-D-glucuronoyl moiety, not influenced by the nature of the attached xylo-oligosaccharide. Structural and sequence comparisons within CE15 enzymes reveal two distinct structural subgroups. CuGE belongs to the group of fungal CE15-B enzymes with an open and flat substrate-binding site. The interactions between CuGE and its natural substrates are explained and rationalized by the structural results, microscale thermophoresis and isothermal calorimetry.
结构与功能研究木聚糖酶(CuGE)的葡萄糖醛酸酯酶,该酶可催化木质素-碳水化合物酯键的裂解。CuGE 是一种属于碳水化合物酯酶家族 15(CE15)的α/β-水解酶。该酶是模块化的,由催化和碳水化合物结合域组成。小角 X 射线散射(SAXS)数据表明 CuGE 是一个细长的刚性分子,两个结构域通过刚性接头连接。催化结构域在apo 和失活形式以及与 aldouronic 酸的复合物的详细结构信息揭示了 4-O-甲基-α-D-葡萄糖醛酸部分的明确结合,不受附着的木寡糖的性质的影响。CE15 酶内的结构和序列比较揭示了两个不同的结构亚群。CuGE 属于真菌 CE15-B 酶,具有开放和平坦的底物结合位点。通过结构结果、微量热泳动和等温量热法解释和合理化 CuGE 与其天然底物之间的相互作用。