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sp. nov.,分离自龟山岛近海海域热液系统。

sp. nov., isolated from shallow-sea hydrothermal systems off Kueishantao Island.

机构信息

State Key Laboratory of Marine Environmental Science, Institute of Marine Microbes and Ecospheres, College of Ocean and Earth Sciences, Xiamen University, Xiamen 361102, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Apr;70(4):2554-2559. doi: 10.1099/ijsem.0.004068. Epub 2020 Feb 26.

Abstract

An orange-pigmented, short-rod-shaped, aerobic and non-motile bacterial strain, designated TK008, was isolated from the shallow-sea hydrothermal systems off Kueishantao Island in Taiwan, China, and it was studied by using a polyphasic taxonomic approach. Cells were Gram-stain-negative, and catalase- and oxidase-positive. Strain TK008 exhibited highest 16S rRNA gene sequence similarity of 97.1 % to F14. The phylogenetic trees based on 16S rRNA gene sequences showed that strain TK008 was a member of the genus . Digital DNA-DNA hybridization values between strain TK008 and two closely related species ( and ) were 20.6 and 20.9 %. The average nucleotide identity values of strain TK008 compared with and were 75.2 and 74.6 % respectively. The major isoprenoid quinone was ubiquinone-10. The predominant fatty acids (>10 %) were summed feature 8 (Cω6 and/or Cω7). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, three unidentified phospholipids, two unidentified lipids and an unidentified glycolipid. The DNA G+C content of strain TK008 from genomic sequence data was 62.54 mol%. On the basis of polyphasic analysis, strain TK008 represents a novel species, for which the name sp. nov. is proposed. The type strain is TK008 (=CGMCC 1.13898=JCM 33630).

摘要

一株橙色、短杆状、需氧且不运动的细菌菌株,被命名为 TK008,从中国台湾龟山岛附近的浅海热液系统中分离得到,通过多相分类学方法进行了研究。细胞革兰氏染色阴性,过氧化氢酶和氧化酶阳性。菌株 TK008 与 F14 的 16S rRNA 基因序列相似性最高,为 97.1%。基于 16S rRNA 基因序列构建的系统发育树显示,菌株 TK008 是 属的一个成员。菌株 TK008 与两个密切相关的种(和)之间的数字 DNA-DNA 杂交值分别为 20.6%和 20.9%。与和的平均核苷酸身份值分别为 75.2%和 74.6%。主要的类异戊二烯醌是泛醌-10。主要脂肪酸(>10%)为 summed feature 8(Cω6 和/或 Cω7)。极性脂为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、三种未鉴定的磷脂、两种未鉴定的脂和一种未鉴定的糖脂。基于基因组序列数据,菌株 TK008 的 DNA G+C 含量为 62.54mol%。基于多相分析,菌株 TK008 代表一个新种,建议命名为 sp. nov.。其模式菌株为 TK008(=CGMCC 1.13898=JCM 33630)。

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