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本地生物水的氢键自由能。

Hydrogen-Bond Free Energy of Local Biological Water.

机构信息

Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology, Ulsan, 44919, Republic of Korea.

Department of Energy Engineering, School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology, Ulsan, 44919, Republic of Korea.

出版信息

Angew Chem Int Ed Engl. 2020 Apr 27;59(18):7089-7096. doi: 10.1002/anie.202002025. Epub 2020 Mar 31.

Abstract

Here, we propose an experimental methodology based on femtosecond-resolved fluorescence spectroscopy to measure the hydrogen (H)-bond free energy of water at protein surfaces under isothermal conditions. A demonstration was conducted by installing a non-canonical isostere of tryptophan (7-azatryptophan) at the surface of a coiled-coil protein to exploit the photoinduced proton transfer of its chromophoric moiety, 7-azaindole. The H-bond free energy of this biological water was evaluated by comparing the rates of proton transfer, sensitive to the hydration environment, at the protein surface and in bulk water, and it was found to be higher than that of bulk water by 0.4 kcal mol . The free-energy difference is dominated by the entropic cost in the H-bond network among water molecules at the hydrophilic and charged protein surface. Our study opens a door to accessing the energetics and dynamics of local biological water to give insight into its roles in protein structure and function.

摘要

在这里,我们提出了一种基于飞秒分辨荧光光谱的实验方法,用于在等温条件下测量蛋白质表面上水的氢键自由能。通过在螺旋蛋白表面安装色氨酸的非规范同肽(7-氮杂色氨酸),我们进行了演示,以利用其发色团 7-氮杂吲哚的光致质子转移。通过比较蛋白质表面和体相水中质子转移的速率(对水合环境敏感),评估了这种生物水的氢键自由能,发现其比体相水高 0.4 kcal/mol。自由能差主要由亲水和带电蛋白质表面上水分子氢键网络中的熵成本决定。我们的研究为了解局部生物水的能量学和动力学打开了一扇门,有助于深入了解其在蛋白质结构和功能中的作用。

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