从中国健康苹果中分离出的菌株的基因组序列数据草案。
Draft genome sequence data of strain , isolated from healthy apples in China.
作者信息
Zeng Qingchao, Xie Jianbo, Li Yan, Gu Xiaofei, Wang Qi
机构信息
College of Plant Protection, Key Laboratory of Plant Pathology, Ministry of Agriculture, China Agricultural University, Beijing, China.
College of Biological Sciences and Technology, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, Beijing Forestry University, Beijing, China.
出版信息
Data Brief. 2020 Feb 8;29:105143. doi: 10.1016/j.dib.2020.105143. eCollection 2020 Apr.
strain 9407 is an endophyte which was isolated from healthy apples from an infested orchard that exhibits strong inhibitory activity against . Whole-genome sequencing of 9407 was performed using the Illumina Hiseq platforms. Here, we report the draft genome sequence of strain 9407 containing 16 scaffolds (4,062,615 bp), 4033 coding sequences, and an average 43.66% G + C content. The genome contains genes responsible for the production of several bioactive secondary metabolites, including the lipopeptides fengycin and surfactin. The genome information will provide fundamental knowledge of the organism. This whole-genome shotgun data has been deposited at DDBJ/EMBL/GenBank under the accession numbers PISO00000000.
菌株9407是一种从受侵染果园的健康苹果中分离出的内生菌，它对……表现出很强的抑制活性。使用Illumina Hiseq平台对菌株9407进行了全基因组测序。在此，我们报告了菌株9407的基因组草图序列，其包含16个支架（4,062,615 bp）、4033个编码序列，平均G + C含量为43.66%。该基因组包含负责多种生物活性次生代谢产物合成的基因，包括脂肽丰原素和表面活性素。这些基因组信息将为该生物体提供基础知识。这个全基因组鸟枪法数据已保存在DDBJ/EMBL/GenBank中，登录号为PISO00000000。
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