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来自海滩土壤的A1-米达拉姆基因组数据。

Data on the genome of A1- Midalam from beach soil.

作者信息

Pramod Sneha, Thommana Rhea Thomas, Kulanthaivelu Kanagam Harini, Suresh Kumar Ashmita, S Santha Kalaikumari, Elangovan Elavarashi, Perumal Kumar

机构信息

Biochemistry and Molecular Biology Department, Johns Hopkins University, Bloomberg School of Public Health, Baltimore, USA.

Department of Food and Bioproduct Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Canada.

出版信息

Data Brief. 2021 Nov 7;39:107552. doi: 10.1016/j.dib.2021.107552. eCollection 2021 Dec.

DOI:10.1016/j.dib.2021.107552
PMID:34820494
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8601982/
Abstract

The draft genome sequence of A1, isolated from beach soil, has been shown to produce biofilm. The genome size is 4,215,114 bp with an average G+C content of 43.5%. The genome of Bacillus subtilis A1 has 4413 total genes which include 4166 protein-coding sequences, 126 pseudo genes, 10 rRNA genes with 3 operons (5S, 16S and 23S), 86 tRNA genes and 5 noncoding RNA (ncRNA) genes. The genome contains genes coding for surfactin, fengycin, bacillaene, sublancin 168, bacillibactin, subtilosin A, bacilysin. The whole genome project has been deposited in GenBank under the accession number CP075344.1. The raw data is available at https://www.ncbi.nlm.nih.gov/nuccore/CP075344.1.

摘要

从海滩土壤中分离出的A1的基因组序列草图已显示其能产生生物膜。基因组大小为4,215,114碱基对,平均G+C含量为43.5%。枯草芽孢杆菌A1的基因组共有4413个基因,其中包括4166个蛋白质编码序列、126个假基因、10个rRNA基因(含3个操纵子,即5S、16S和23S)、86个tRNA基因和5个非编码RNA(ncRNA)基因。该基因组包含编码表面活性素、丰原素、芽孢杆菌烯、枯草菌素168、杆菌铁载体、枯草杆菌素A、杆菌溶素的基因。整个基因组计划已存入GenBank,登录号为CP075344.1。原始数据可在https://www.ncbi.nlm.nih.gov/nuccore/CP075344.1获取。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/e1b659aec291/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/801ada2bf8e8/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/03712549107d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/9d9fbff450bb/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/320a2c32885c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/e1b659aec291/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/801ada2bf8e8/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/03712549107d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/9d9fbff450bb/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/320a2c32885c/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71bf/8601982/e1b659aec291/gr5.jpg

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