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从奇异环境的宏基因组中获得的独特嗜热嗜盐硫氧还蛋白的分子和功能特征。

Molecular and functional characterization of unique thermo-halophilic thioredoxin from the metagenome of an exotic environment.

机构信息

Biology Department, American University in Cairo, Egypt.

Biochemistry Department, Faculty of Science, Ain Shams University, Cairo, Egypt.

出版信息

Int J Biol Macromol. 2020 Jun 15;153:767-778. doi: 10.1016/j.ijbiomac.2020.03.011. Epub 2020 Mar 3.

Abstract

The lower convective layer (LCL) at Atlantis II brine pool of the Red sea represents one of the exceptional, unique ecosystems. Thioredoxin is a multi-functional antioxidant redox protein that has a crucial role in various vital cellular processes. In the current study, a functional metagenomics approach was used to isolate and characterize thioredoxin from the LCL of Atlantis II Deep brine pool (Trx-ATII). From the metagenomic DNA of the LCL, the thioredoxin gene was directly retrieved and sequenced. Sequence analysis showed that the gene belonged to thioredoxin-like superfamily with classical Trx motif (-CXXC-). Phylogenetic analysis revealed that Trx-ATII was closely related to Trx of Prochlorococcus marinus with a maximum identity of 86%. Successfully, Trx-ATII was cloned and expressed in E. coli, where the purified protein had M.wt of 16 kDa. Characterization studies revealed that Trx-ATII protein is halophilic; can tolerate up to 2.5 M NaCl and thermostable, where 90% of its activity was retained at 60 °C. Trx-ATII can reduce both DTNB and insulin disulfide- containing substrates. In conclusion, a unique thioredoxin protein was isolated from a harsh environment that can maintain its activity under extreme conditions of salinity and temperature as a promising redox protein for biotechnological applications.

摘要

红海 Atlantis II 卤水湖中下部对流层(LCL)是一种特殊而独特的生态系统。硫氧还蛋白是一种多功能抗氧化剂还原蛋白,在各种重要的细胞过程中起着关键作用。在本研究中,采用功能宏基因组学方法从 Atlantis II 深海卤水池 LCL 中分离并鉴定硫氧还蛋白(Trx-ATII)。从 LCL 的宏基因组 DNA 中,直接回收并测序了硫氧还蛋白基因。序列分析表明,该基因属于具有经典 Trx 基序(-CXXC-)的硫氧还蛋白超家族。系统发育分析表明,Trx-ATII 与海洋原绿球藻的 Trx 密切相关,最大同一性为 86%。成功地在大肠杆菌中克隆和表达了 Trx-ATII,纯化的蛋白分子量为 16 kDa。特性研究表明,Trx-ATII 蛋白是嗜盐的;可耐受高达 2.5 M NaCl 且热稳定,在 60°C 时仍保留其 90%的活性。Trx-ATII 可还原 DTNB 和含有胰岛素二硫键的底物。总之,从恶劣环境中分离出一种独特的硫氧还蛋白,它可以在盐度和温度的极端条件下保持其活性,作为一种有前途的生物技术应用的氧化还原蛋白。

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