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数据驱动的前列腺癌转化研究:从生物标志物发现到临床决策

Data-driven translational prostate cancer research: from biomarker discovery to clinical decision.

作者信息

Lin Yuxin, Zhao Xiaojun, Miao Zhijun, Ling Zhixin, Wei Xuedong, Pu Jinxian, Hou Jianquan, Shen Bairong

机构信息

Department of Urology, The First Affiliated Hospital of Soochow University, Suzhou, 215006, China.

Department of Urology, Suzhou Dushuhu Public Hospital, Suzhou, 215123, China.

出版信息

J Transl Med. 2020 Mar 7;18(1):119. doi: 10.1186/s12967-020-02281-4.

DOI:10.1186/s12967-020-02281-4
PMID:32143723
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7060655/
Abstract

Prostate cancer (PCa) is a common malignant tumor with increasing incidence and high heterogeneity among males worldwide. In the era of big data and artificial intelligence, the paradigm of biomarker discovery is shifting from traditional experimental and small data-based identification toward big data-driven and systems-level screening. Complex interactions between genetic factors and environmental effects provide opportunities for systems modeling of PCa genesis and evolution. We hereby review the current research frontiers in informatics for PCa clinical translation. First, the heterogeneity and complexity in PCa development and clinical theranostics are introduced to raise the concern for PCa systems biology studies. Then biomarkers and risk factors ranging from molecular alternations to clinical phenotype and lifestyle changes are explicated for PCa personalized management. Methodologies and applications for multi-dimensional data integration and computational modeling are discussed. The future perspectives and challenges for PCa systems medicine and holistic healthcare are finally provided.

摘要

前列腺癌(PCa)是一种常见的恶性肿瘤,在全球男性中发病率不断上升且具有高度异质性。在大数据和人工智能时代,生物标志物发现的模式正从传统的基于实验和小数据的识别转向大数据驱动和系统层面的筛选。遗传因素与环境效应之间的复杂相互作用为前列腺癌发生和发展的系统建模提供了机会。我们在此回顾前列腺癌临床转化信息学的当前研究前沿。首先,介绍前列腺癌发展及临床诊疗中的异质性和复杂性,以引发对前列腺癌系统生物学研究的关注。然后阐述从分子改变到临床表型及生活方式变化等方面的生物标志物和风险因素,用于前列腺癌的个性化管理。讨论了多维度数据整合和计算建模的方法及应用。最后给出了前列腺癌系统医学和整体医疗的未来前景与挑战。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/bb2f9154a368/12967_2020_2281_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/cd7c9356bb0d/12967_2020_2281_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/82eb580cb7b2/12967_2020_2281_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/fa62603af9e5/12967_2020_2281_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/bb2f9154a368/12967_2020_2281_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/cd7c9356bb0d/12967_2020_2281_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/82eb580cb7b2/12967_2020_2281_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/fa62603af9e5/12967_2020_2281_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be13/7060655/bb2f9154a368/12967_2020_2281_Fig4_HTML.jpg

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本文引用的文献

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Revisiting Immunotherapy: A Focus on Prostate Cancer.重新审视免疫疗法:聚焦前列腺癌。
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UBASH3B Is a Novel Prognostic Biomarker and Correlated With Immune Infiltrates in Prostate Cancer.UBASH3B是一种新型的预后生物标志物,与前列腺癌中的免疫浸润相关。
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Clinical application of immune checkpoints in targeted immunotherapy of prostate cancer.免疫检查点在前列腺癌靶向免疫治疗中的临床应用。
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Signet-ring cell carcinoma in rectal malignancies: a case report with an unexpected outcome.直肠恶性肿瘤中的印戒细胞癌:一例意外结局的病例报告
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WGCNA-ML-MR integration: uncovering immune-related genes in prostate cancer.加权基因共表达网络分析-机器学习-孟德尔随机化整合:揭示前列腺癌中的免疫相关基因
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Elevated miR-221-3p inhibits epithelial-mesenchymal transition and biochemical recurrence of prostate cancer via targeting KPNA2: an evidence-based and knowledge-guided strategy.升高的miR-221-3p通过靶向核转运蛋白α2抑制前列腺癌的上皮-间质转化和生化复发:一种基于证据和知识引导的策略
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Molecular landscape for risk prediction and personalized therapeutics of castration-resistant prostate cancer: at a glance.去势抵抗性前列腺癌的风险预测和个体化治疗的分子图谱:一览无余。
Front Endocrinol (Lausanne). 2024 Jun 3;15:1360430. doi: 10.3389/fendo.2024.1360430. eCollection 2024.
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A Tale of Two Cancers: A Current Concise Overview of Breast and Prostate Cancer.两种癌症的故事:乳腺癌和前列腺癌的当前简要概述
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Nano-Theranostics for the Sensing, Imaging and Therapy of Prostate Cancers.用于前列腺癌传感、成像和治疗的纳米诊疗学
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