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与翠菊、万寿菊和菊花上翠菊黄化病相关叶蝉的DNA条形码及系统发育分析

DNA barcoding and phylogenetic analysis of leafhoppers associated with Aster Yellow disease on China aster, Marigold and Chrysanthemum.

作者信息

Hanchipura Mallesh Mahadeva Swamy, Asokan Ramasamy, Gadad Hanamant, Duleep Kumar Samuel, Kumar Rajiv, Prakash Tejaswini

机构信息

Bio-Pesticide Laboratory, Division of Biotechnology, ICAR Indian Institute of Horticultural Research (IIHR), Bangalore, India.

Division of Plant Pathology, ICAR Indian Institute of Horticultural Research (IIHR), Bangalore, India.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2020 Mar;31(2):64-72. doi: 10.1080/24701394.2020.1735378. Epub 2020 Mar 9.

Abstract

The Cicadellidae (Auchenorrhyncha: Hemiptera) are important agricultural, horticultural and ornamental pests. But it is very difficult to define nymphs and female adults using morphological characteristics. This research was aimed at understanding the variety of leafhoppers species and defining the prospective cause of the aster-yellow disease in China Aster, Marigold and Chrysanthemum. Two surveys were conducted in and around Pune, Maharashtra and Bengaluru, Karnataka between November 2016 and February 2017. The mitochondrial cytochrome oxidase subunit I (mtCOI) region marker was used in the species diagnosis and genetic diversity research. Through the use of mtCOI molecular marker eight different leafhoppers species were identified as . Whereas at genus level identified as species. These results are strongly corroborated with morphological identification. On the basis of multiple sequence alignment of the mtCOI gene, a species phylogenetic tree with the highest likelihood was drawn. All the leafhopper species clustered together in accordance with the species data collected from the database of the different geographic regions from the NCBI GenBank and Barcode of Life (BOLD). Such results suggest that it is important to use both molecular and morphological methods to ensure accurate identification of organisms. To conclude, this research contributes valuable knowledge to molecular biology and recognizes leafhopper species that serve as major phytoplasma vectors.

摘要

叶蝉科(半翅目:头喙亚目)是重要的农业、园艺和观赏植物害虫。但利用形态特征来界定若虫和雌成虫非常困难。本研究旨在了解叶蝉种类的多样性,并确定在中国紫菀、万寿菊和菊花上引起翠菊黄化病的潜在病因。2016年11月至2017年2月期间,在马哈拉施特拉邦的浦那及其周边地区以及卡纳塔克邦的班加罗尔进行了两次调查。线粒体细胞色素氧化酶亚基I(mtCOI)区域标记用于物种诊断和遗传多样性研究。通过使用mtCOI分子标记,鉴定出8种不同的叶蝉物种。而在属的水平上鉴定出了 个物种。这些结果得到形态学鉴定的有力证实。基于mtCOI基因的多序列比对,绘制了可能性最高的物种系统发育树。所有叶蝉物种都根据从NCBI GenBank和生命条形码(BOLD)的不同地理区域数据库中收集的物种数据聚集在一起。这些结果表明,使用分子和形态学方法来确保准确鉴定生物体很重要。总之,本研究为分子生物学贡献了有价值的知识,并识别出作为主要植原体载体的叶蝉物种。

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