Gill Pooria, Hadian Amree Arash
Department of Medical Nanotechnology, Faculty of Advanced Technologies in Medicine, Mazandaran University of Medical Sciences, Sari, Iran.
Student Research Committee, Thalassemia Research Center, Hemoglobinopathy Institute, Mazandaran University of Medical Sciences, Sari, Iran.
Avicenna J Med Biotechnol. 2020 Jan-Mar;12(1):2-8.
In recent decades, different methods have been introduced for the genotyping of Single Nucleotide Polymorphisms (SNPs) and mutations in nucleic acid sequences. These methods have several applications ranging from agriculture to medicine. The Loop-mediated isothermal amplification (LAMP) method was first introduced by Notomi . Since then, different methods derived from LAMP have been extensively applied in detecting pathogens. The LAMP method is an isothermal technique that amplifies the target DNA segment using four different primers that have been uniquely designed for recognizing six distinct zones on the objective gene; the process of reaction continues at a constant temperature a strand displacement reaction. Amplifying and detecting the targeted zone can be accomplished in one stage. Although the LAMP method is mostly used for pathogen detection, several studies have used this method for genotyping. The present article reviewed various studies that used the LAMP method for SNP detection. The outcomes indicated that the LAMP technique could be a reliable and alternative technique for genotyping. Further studies are recommended to use this approach for genotyping.
近几十年来,已引入了不同方法用于单核苷酸多态性(SNP)基因分型以及核酸序列中的突变分析。这些方法有着从农业到医学等多种应用。环介导等温扩增(LAMP)方法由野富首先提出。从那时起,源自LAMP的不同方法已广泛应用于病原体检测。LAMP方法是一种等温技术,它使用四种专门设计用于识别目标基因上六个不同区域的不同引物来扩增目标DNA片段;反应过程在恒定温度下持续进行——链置换反应。扩增和检测目标区域可在一个阶段完成。尽管LAMP方法主要用于病原体检测,但已有多项研究将该方法用于基因分型。本文综述了使用LAMP方法进行SNP检测的各类研究。结果表明,LAMP技术可能是一种用于基因分型的可靠替代技术。建议进一步开展研究将该方法用于基因分型。