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整合组学分析揭示可溶性钙黏蛋白 3 作为肺癌表皮生长因子受体酪氨酸激酶抑制剂治疗的生存预测因子和早期监测标志物。

Integrative Omics Analysis Reveals Soluble Cadherin-3 as a Survival Predictor and an Early Monitoring Marker of EGFR Tyrosine Kinase Inhibitor Therapy in Lung Cancer.

机构信息

Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

School of Medicine, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

出版信息

Clin Cancer Res. 2020 Jul 1;26(13):3220-3229. doi: 10.1158/1078-0432.CCR-19-3972. Epub 2020 Mar 10.

DOI:10.1158/1078-0432.CCR-19-3972
PMID:32156745
Abstract

PURPOSE

EGFR tyrosine kinase inhibitors (EGFR-TKI) benefit patients with advanced lung adenocarcinoma (ADC) harboring activating EGFR mutations. We aimed to identify biomarkers to monitor and predict the progression of patients receiving EGFR-TKIs via a comprehensive omic analysis.

EXPERIMENTAL DESIGN

We applied quantitative proteomics to generate the TKI resistance-associated pleural effusion (PE) proteome from patients with ADC with or without EGFR-TKI resistance. Candidates were selected from integrated genomic and proteomic datasets. The PE ( = 33) and serum ( = 329) levels of potential biomarkers were validated with ELISAs. Western blotting was applied to detect protein expression in tissues, PEs, and a cell line. Gene knockdown, TKI treatment, and proliferation assays were used to determine EGFR-TKI sensitivity. Progression-free survival (PFS) and overall survival (OS) were assessed to evaluate the prognostic values of the potential biomarkers.

RESULTS

Fifteen proteins were identified as potential biomarkers of EGFR-TKI resistance. Cadherin-3 (CDH3) was overexpressed in ADC tissues compared with normal tissues. CDH3 knockdown enhanced EGFR-TKI sensitivity in ADC cells. The PE level of soluble CDH3 (sCDH3) was increased in patients with resistance. The altered sCDH3 serum level reflected the efficacy of EGFR-TKI after 1 month of treatment ( = 43). Baseline sCDH3 was significantly associated with PFS and OS in patients with ADC after EGFR-TKI therapy ( = 76). Moreover, sCDH3 was positively associated with tumor stage in non-small cell lung cancer ( = 272).

CONCLUSIONS

We provide useful marker candidates for drug resistance studies. sCDH3 is a survival predictor and real-time indicator of treatment efficacy in patients with ADC treated with EGFR-TKIs.

摘要

目的

表皮生长因子受体酪氨酸激酶抑制剂(EGFR-TKI)可使携带激活型表皮生长因子受体(EGFR)突变的晚期肺腺癌(ADC)患者获益。我们旨在通过全面的组学分析,确定用于监测和预测接受 EGFR-TKI 治疗的患者进展的生物标志物。

实验设计

我们应用定量蛋白质组学技术,从具有或不具有 EGFR-TKI 耐药性的 ADC 患者的耐药性相关胸腔积液(PE)中生成 TKI 耐药相关的 PE 蛋白质组。候选物从整合的基因组和蛋白质组数据集进行选择。通过 ELISA 验证潜在生物标志物的 PE(=33)和血清(=329)水平。应用 Western blot 检测组织、PE 和细胞系中的蛋白表达。基因敲低、TKI 处理和增殖测定用于确定 EGFR-TKI 敏感性。评估无进展生存期(PFS)和总生存期(OS)以评估潜在生物标志物的预后价值。

结果

鉴定出 15 种蛋白质作为 EGFR-TKI 耐药的潜在生物标志物。与正常组织相比,在 ADC 组织中发现钙黏蛋白-3(CDH3)过度表达。在 ADC 细胞中,CDH3 敲低增强了 EGFR-TKI 敏感性。耐药患者的 PE 中可溶性 CDH3(sCDH3)水平升高。治疗 1 个月后,sCDH3 的改变血清水平反映了 EGFR-TKI 的疗效(=43)。在接受 EGFR-TKI 治疗后,ADC 患者的基线 sCDH3与 PFS 和 OS 显著相关(=76)。此外,sCDH3 与非小细胞肺癌的肿瘤分期呈正相关(=272)。

结论

我们提供了用于耐药性研究的有用的标记物候选物。sCDH3 是接受 EGFR-TKI 治疗的 ADC 患者的生存预测因子和治疗效果的实时指标。

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