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从菲律宾拉古纳省马基林山泥泉水中富含纤维素的混合培养物的基因组 DNA 中扩增得到的耐热内切葡聚糖酶基因。

Thermostable endoglucanase gene derived by amplification from the genomic DNA of a cellulose-enriched mixed culture from mudspring water of Mt. Makiling, Laguna, Philippines.

机构信息

BIOTECH, University of the Philippines Los Baños, 4031, College, Laguna, Philippines.

Microbiology Division, IBS, U.P. Los Baños, Philippines, 4031, College, Laguna, Philippines.

出版信息

World J Microbiol Biotechnol. 2020 Mar 10;36(3):51. doi: 10.1007/s11274-020-02825-2.

Abstract

Culture-independent molecular-based approaches can be used to identify genes of interest from environmental sources that have desirable properties such as thermo activity. For this study, a putative thermo stable endoglucanase gene was identified from a mixed culture resulting from the inoculation of Brock-CMcellulose (1%) broth with mudspring water from Mt. Makiling, Laguna, Philippines that had been incubated at 90 °C. Genomic DNA was extracted from the cellulose-enriched mixed culture and endo1949 forward and reverse primers were used to amplify the endoglucanase gene, which was cloned into pCR-script plasmid vector. Blastn alignment of the sequenced insert revealed 99.69% similarity to the glycosyl hydrolase, sso1354 (CelA1; Q97YG7) from Saccharolobus solfataricus. The endoglucanase gene (GenBank accession number MK984682) was determined to be 1,021 nucleotide bases in length, corresponding to 333 amino acids with a molecular mass of ~ 37 kDa. The endoglucanase gene was inserted into a pET21 vector and transformed in E. coli BL21 for expression. Partially purified recombinant Mt. Makiling endoglucanase (MM-Engl) showed a specific activity of 187.61 U/mg and demonstrated heat stability up to 80 °C. The thermo-acid stable endoglucanase can be used in a supplementary hydrolysis step to further hydrolyze the lignocellulosic materials that were previously treated under high temperature-dilute acid conditions, thereby enhancing the release of more glucose sugars for bioethanol production.

摘要

非培养的基于分子的方法可用于从具有理想特性(如热活性)的环境来源中鉴定感兴趣的基因。在这项研究中,从接种 Brock-CM 纤维素(1%)肉汤的 Mudspring 水的混合培养物中鉴定出一种假定的耐热内切葡聚糖酶基因,该培养物来自菲律宾 Laguna 的 Makiling 山,在 90°C 下孵育。从富含纤维素的混合培养物中提取基因组 DNA,并使用 endo1949 正向和反向引物扩增内切葡聚糖酶基因,将其克隆到 pCR-script 质粒载体中。测序插入片段的 Blastn 比对显示与嗜热硫磺酸球菌的糖苷水解酶 sso1354(CelA1;Q97YG7)具有 99.69%的相似性。内切葡聚糖酶基因(GenBank 登录号 MK984682)的长度为 1021 个碱基,对应 333 个氨基酸,分子量约为 37 kDa。将内切葡聚糖酶基因插入 pET21 载体中,并转化到大肠杆菌 BL21 中进行表达。部分纯化的重组 Mt. Makiling 内切葡聚糖酶(MM-Engl)的比活为 187.61 U/mg,表现出高达 80°C 的热稳定性。耐热酸性内切葡聚糖酶可用于补充水解步骤,进一步水解先前在高温稀酸条件下处理的木质纤维素材料,从而提高用于生物乙醇生产的更多葡萄糖的释放。

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