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New insights into human lysine degradation pathways with relevance to pyridoxine-dependent epilepsy due to antiquitin deficiency.与人赖氨酸降解途径相关的新见解与抗坏血酸缺乏引起的依赖吡哆醇的癫痫有关。
J Inherit Metab Dis. 2019 Jul;42(4):620-628. doi: 10.1002/jimd.12076. Epub 2019 Apr 15.
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Patterns, evolution, and severity of striatal injury in insidious- vs acute-onset glutaric aciduria type 1.缓慢进展型与急性起病型 1 型戊二酸血症的纹状体损伤模式、演变和严重程度。
J Inherit Metab Dis. 2019 Jan;42(1):117-127. doi: 10.1002/jimd.12033.
3
Mild inborn errors of metabolism in commonly used inbred mouse strains.常见近交系小鼠的轻度先天性代谢缺陷。
Mol Genet Metab. 2019 Apr;126(4):388-396. doi: 10.1016/j.ymgme.2019.01.021. Epub 2019 Jan 24.
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FASEB J. 2019 Mar;33(3):4355-4364. doi: 10.1096/fj.201801498R. Epub 2018 Dec 12.
5
Evidence for functional and regulatory cross-talk between the tricarboxylic acid cycle 2-oxoglutarate dehydrogenase complex and 2-oxoadipate dehydrogenase on the l-lysine, l-hydroxylysine and l-tryptophan degradation pathways from studies in vitro.从体外研究中,证明三羧酸循环 2-酮戊二酸脱氢酶复合体和 2-酮戊二酸脱氢酶在 l-赖氨酸、l-羟赖氨酸和 l-色氨酸降解途径中的功能和调控交叉对话。
Biochim Biophys Acta Bioenerg. 2018 Sep;1859(9):932-939. doi: 10.1016/j.bbabio.2018.05.001. Epub 2018 May 9.
6
The mitochondrial 2-oxoadipate and 2-oxoglutarate dehydrogenase complexes share their E2 and E3 components for their function and both generate reactive oxygen species.线粒体 2-氧代戊二酸和 2-氧代戊二酸脱氢酶复合物共享其 E2 和 E3 成分以发挥其功能,并且两者均会产生活性氧物质。
Free Radic Biol Med. 2018 Feb 1;115:136-145. doi: 10.1016/j.freeradbiomed.2017.11.018. Epub 2017 Dec 1.
7
Thiamine Induces Long-Term Changes in Amino Acid Profiles and Activities of 2-Oxoglutarate and 2-Oxoadipate Dehydrogenases in Rat Brain.硫胺素诱导大鼠脑内氨基酸谱以及2-氧代戊二酸和2-氧代己二酸脱氢酶活性的长期变化。
Biochemistry (Mosc). 2017 Jun;82(6):723-736. doi: 10.1134/S0006297917060098.
8
Elevated glutaric acid levels in Dhtkd1-/Gcdh- double knockout mice challenge our current understanding of lysine metabolism.Dhtkd1-/Gcdh- 双基因敲除小鼠中天冬氨酸水平升高,这对我们目前对赖氨酸代谢的理解提出了挑战。
Biochim Biophys Acta Mol Basis Dis. 2017 Sep;1863(9):2220-2228. doi: 10.1016/j.bbadis.2017.05.018. Epub 2017 May 22.
9
Mouse lysine catabolism to aminoadipate occurs primarily through the saccharopine pathway; implications for pyridoxine dependent epilepsy (PDE).鼠赖氨酸分解代谢为氨基己二酸主要通过 saccharopine 途径进行;对吡哆醇依赖性癫痫(PDE)的影响。
Biochim Biophys Acta Mol Basis Dis. 2017 Jan;1863(1):121-128. doi: 10.1016/j.bbadis.2016.09.006. Epub 2016 Sep 8.
10
Defining the consequences of genetic variation on a proteome-wide scale.在蛋白质组范围内定义基因变异的后果。
Nature. 2016 Jun 23;534(7608):500-5. doi: 10.1038/nature18270. Epub 2016 Jun 15.

DHTKD1 和 OGDH 在培养细胞中显示底物重叠,并在体内形成混合 2-氧代酸脱氢酶复合物。

DHTKD1 and OGDH display substrate overlap in cultured cells and form a hybrid 2-oxo acid dehydrogenase complex in vivo.

机构信息

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

出版信息

Hum Mol Genet. 2020 May 8;29(7):1168-1179. doi: 10.1093/hmg/ddaa037.

DOI:10.1093/hmg/ddaa037
PMID:32160276
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7206849/
Abstract

Glutaric aciduria type 1 (GA1) is an inborn error of lysine degradation characterized by a specific encephalopathy that is caused by toxic accumulation of lysine degradation intermediates. Substrate reduction through inhibition of DHTKD1, an enzyme upstream of the defective glutaryl-CoA dehydrogenase, has been investigated as a potential therapy, but revealed the existence of an alternative enzymatic source of glutaryl-CoA. Here, we show that loss of DHTKD1 in glutaryl-CoA dehydrogenase-deficient HEK-293 cells leads to a 2-fold decrease in the established GA1 clinical biomarker glutarylcarnitine and demonstrate that oxoglutarate dehydrogenase (OGDH) is responsible for this remaining glutarylcarnitine production. We furthermore show that DHTKD1 interacts with OGDH, dihydrolipoyl succinyltransferase and dihydrolipoamide dehydrogenase to form a hybrid 2-oxoglutaric and 2-oxoadipic acid dehydrogenase complex. In summary, 2-oxoadipic acid is a substrate for DHTKD1, but also for OGDH in a cell model system. The classical 2-oxoglutaric dehydrogenase complex can exist as a previously undiscovered hybrid containing DHTKD1 displaying improved kinetics towards 2-oxoadipic acid.

摘要

1 型戊二酸尿症(GA1)是一种赖氨酸降解的先天性错误,其特征是特定的脑病,由赖氨酸降解中间产物的毒性积累引起。通过抑制 DHTKD1(缺陷的谷氨酰辅酶 A 脱氢酶上游的酶)来减少底物,已被研究作为一种潜在的治疗方法,但揭示了谷氨酰辅酶 A 的替代酶源的存在。在这里,我们表明,在谷氨酰辅酶 A 脱氢酶缺陷的 HEK-293 细胞中缺失 DHTKD1 会导致已建立的 GA1 临床生物标志物戊二酰肉碱减少 2 倍,并且证明草酰戊二酸脱氢酶(OGDH)负责这种剩余的戊二酰肉碱的产生。我们进一步表明,DHTKD1 与 OGDH、二氢硫辛酰基琥珀酰基转移酶和二氢硫辛酰胺脱氢酶相互作用,形成混合的 2-酮戊二酸和 2-酮己二酸脱氢酶复合物。总之,2-酮己二酸是 DHTKD1 的底物,但在细胞模型系统中也是 OGDH 的底物。经典的 2-酮戊二酸脱氢酶复合物可以作为一种以前未被发现的包含 DHTKD1 的混合体存在,显示出对 2-酮己二酸的改进动力学。