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使用差分扩展显微镜进行纳米级成像。

Nanoscale imaging using differential expansion microscopy.

机构信息

Department of Physiology, Wayne State University School of Medicine, 540 E. Canfield, 5245, 5215 Scott Hall, Detroit, MI, 48201, USA.

NanoBioScience Institute, Wayne State University, Detroit, MI, 48201, USA.

出版信息

Histochem Cell Biol. 2020 Jun;153(6):469-480. doi: 10.1007/s00418-020-01869-7. Epub 2020 Mar 19.

DOI:10.1007/s00418-020-01869-7
PMID:32193594
Abstract

Expensive and time-consuming approaches of immunoelectron microscopy of biopsy tissues continues to serve as the gold-standard for diagnostic pathology. The recent development of the new approach of expansion microscopy (ExM) capable of fourfold lateral expansion of biological specimens for their morphological examination at approximately 70 nm lateral resolution using ordinary diffraction limited optical microscopy, is a major advancement in cellular imaging. Here we report (1) an optimized fixation protocol for retention of cellular morphology while obtaining optimal expansion, (2) an ExM procedure for up to eightfold lateral and over 500-fold volumetric expansion, (3) demonstrate that ExM is anisotropic or differential between tissues, cellular organelles and domains within organelles themselves, and (4) apply image analysis and machine learning (ML) approaches to precisely assess differentially expanded cellular structures. We refer to this enhanced ExM approach combined with ML as differential expansion microscopy (DiExM), applicable to profiling biological specimens at the nanometer scale. DiExM holds great promise for the precise, rapid and inexpensive diagnosis of disease from pathological specimen slides.

摘要

昂贵且耗时的活检组织免疫电子显微镜方法仍然是诊断病理学的金标准。最近,一种新的扩展显微镜(ExM)方法的发展,能够将生物样本进行四倍的横向扩展,以便在普通的具有衍射极限的光学显微镜下以约 70nm 的横向分辨率对其进行形态学检查,这是细胞成像领域的重大进展。在这里,我们报告了(1)一种优化的固定方案,用于在获得最佳扩展的同时保留细胞形态,(2)一种最多可进行八倍横向和超过 500 倍体积扩展的 ExM 程序,(3)证明 ExM 在组织、细胞细胞器及其自身细胞器内的域之间是各向异性或有差异的,(4)应用图像分析和机器学习(ML)方法来精确评估差异扩展的细胞结构。我们将这种增强的 ExM 方法与 ML 结合称为差异扩展显微镜(DiExM),可用于在纳米尺度上对生物样本进行分析。DiExM 有望实现从病理标本玻片上进行精确、快速和廉价的疾病诊断。

相似文献

1
Nanoscale imaging using differential expansion microscopy.使用差分扩展显微镜进行纳米级成像。
Histochem Cell Biol. 2020 Jun;153(6):469-480. doi: 10.1007/s00418-020-01869-7. Epub 2020 Mar 19.
2
Volumetric, Nanoscale Optical Imaging of Mouse and Human Kidney via Expansion Microscopy.通过扩展显微镜对小鼠和人肾脏进行体视学、纳米级光学成像。
Sci Rep. 2018 Jul 10;8(1):10396. doi: 10.1038/s41598-018-28694-2.
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Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy.使用病理学优化的扩张显微镜对临床标本进行纳米级成像。
Nat Biotechnol. 2017 Aug;35(8):757-764. doi: 10.1038/nbt.3892. Epub 2017 Jul 17.
4
Basics of Expansion Microscopy.扩展显微镜基础
Curr Protoc Cytom. 2019 Dec;91(1):e67. doi: 10.1002/cpcy.67.
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iU-ExM: nanoscopy of organelles and tissues with iterative ultrastructure expansion microscopy.iU-ExM:细胞器和组织的纳米级显微镜检查,采用迭代超微结构扩展显微镜技术。
Nat Commun. 2023 Nov 30;14(1):7893. doi: 10.1038/s41467-023-43582-8.
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Optical imaging. Expansion microscopy.光学成像。扩展显微镜技术。
Science. 2015 Jan 30;347(6221):543-8. doi: 10.1126/science.1260088. Epub 2015 Jan 15.
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Expansion and Light-Sheet Microscopy for Nanoscale 3D Imaging.扩展和光片显微镜用于纳米 3D 成像。
Small Methods. 2024 Oct;8(10):e2301715. doi: 10.1002/smtd.202301715. Epub 2024 Mar 10.
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Protein-Retention Expansion Microscopy (ExM): Scalable and Convenient Super-Resolution Microscopy.蛋白保留拓展显微镜(ExM):可扩展且便利的超高分辨率显微镜。
Methods Mol Biol. 2021;2304:147-156. doi: 10.1007/978-1-0716-1402-0_7.
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Expansion Microscopy: Protocols for Imaging Proteins and RNA in Cells and Tissues.扩展显微镜技术:细胞和组织中蛋白质与RNA成像方案
Curr Protoc Cell Biol. 2018 Sep;80(1):e56. doi: 10.1002/cpcb.56. Epub 2018 Aug 2.
10
Q&A: Expansion microscopy.问答:扩展显微镜技术
BMC Biol. 2017 Jun 19;15(1):50. doi: 10.1186/s12915-017-0393-3.

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